RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 MFSD12Q6NUT3 480 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 IL22RA1Q8N6P7 574 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 GATSQ8NAP1 163 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 VN1R17PQ8TDU5 208 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 HLA-CQ95604 372 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 OR5B12Q96R08 314 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 ARHGDIGQ99819 225 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 HCFC1R1Q9NWW0 138 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 P4HTMQ9NXG6 502 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 HAO2Q9NYQ3 351 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 PDGFBP01127 241 aaPredicted RBP10.92□□□□□ -0.66
MATR3-227ENST00000618441 GCGP01275 180 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 ZNF735P0CB33 412 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 ZNF20P17024 532 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 EPHA1P21709 976 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 UNQ9370/PRO34162Q6UXP9 181 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 DPPA3Q6W0C5 159 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 NUDT10Q8NFP7 164 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 CNRIP1Q96F85 164 aaPredicted RBP10.92□□□□□ -0.66
MATR3-227ENST00000618441 SCARF2Q96GP6 870 aaPredicted RBP10.92□□□□□ -0.66
MATR3-227ENST00000618441 BCL2L10Q9HD36 194 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 MPIG6BO95866 241 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 BCKDHBP21953 392 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 BSGP35613 385 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 SNRPD1P62314 119 aaKnown RBP10.92□□□□□ -0.66
MATR3-227ENST00000618441 HLA-DRB3P79483 266 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 NHLH1Q02575 133 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 TMEM128Q5BJH2 165 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 ZNF573Q86YE8 665 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 OR2I1PQ8NGU4 316 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 FAM103A1Q9BTL3 118 aaKnown RBP10.92□□□□□ -0.66
MATR3-227ENST00000618441 GAL3ST2Q9H3Q3 398 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 TMEM140Q9NV12 185 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 ZNF701Q9NV72 531 aaPredicted RBP10.92□□□□□ -0.66
MATR3-227ENST00000618441 MRPS2Q9Y399 296 aaKnown RBP10.92□□□□□ -0.66
MATR3-227ENST00000618441 INSL5Q9Y5Q6 135 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 DOCK9Q9BZ29 2069 aa10.92□□□□□ -0.66
MATR3-227ENST00000618441 DOCK6Q96HP0 2047 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 C1QTNF3-AMACRE9PGA6 284 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 STC2O76061 302 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 MED25Q71SY5 747 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 GLYATL1Q969I3 302 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 ZNF430Q9H8G1 570 aaPredicted RBP10.91□□□□□ -0.66
MATR3-227ENST00000618441 SPHK2Q9NRA0 654 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 MRM2Q9UI43 246 aaKnown RBP10.91□□□□□ -0.66
MATR3-227ENST00000618441 H3BNC9 293 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 TK1P04183 234 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 DTYMKP23919 212 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 BRS3P32247 399 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 CDK3Q00526 305 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 SLC26A10Q8NG04 563 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 OR5H2Q8NGV7 314 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 DPF1Q92782 380 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 C5orf30Q96GV9 206 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 AQP10Q96PS8 301 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 MTHFD2LQ9H903 347 aaPredicted RBP10.91□□□□□ -0.66
MATR3-227ENST00000618441 SPTBN2O15020 2390 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 TRBV11-1A0A0K0K1C0 115 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 SLC17A2O00624 439 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 COL9A1P20849 921 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 HINT1P49773 126 aaPredicted RBP10.91□□□□□ -0.66
MATR3-227ENST00000618441 RIPPLY3P57055 190 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 TAS2R31P59538 309 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 ENDOGQ14249 297 aaKnown RBP10.91□□□□□ -0.66
MATR3-227ENST00000618441 LCN15Q6UWW0 184 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 ARL14EPQ8N8R7 260 aaPredicted RBP10.91□□□□□ -0.66
MATR3-227ENST00000618441 AGBL5Q8NDL9 886 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 FAM174AQ8TBP5 190 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 ALKBH3Q96Q83 286 aaPredicted RBP10.91□□□□□ -0.66
MATR3-227ENST00000618441 PLA2G3Q9NZ20 509 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 OR52A1Q9UKL2 312 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 RNF150Q9ULK6 438 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 ANKRD36A6QL64 1941 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 MPDZO75970 2070 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 WDR87Q6ZQQ6 2873 aa10.91□□□□□ -0.66
MATR3-227ENST00000618441 C11orf98E9PRG8 122 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 CNIH1O95406 144 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 H2BFMP0C1H6 154 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 CSNK2A1P68400 391 aaPredicted RBP10.9□□□□□ -0.66
MATR3-227ENST00000618441 MRPS34P82930 218 aaKnown RBP10.9□□□□□ -0.66
MATR3-227ENST00000618441 ATP6V1FQ16864 119 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 FCRL6Q6DN72 434 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 ABLIM2Q6H8Q1 611 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 MYPOPQ86VE0 399 aaPredicted RBP10.9□□□□□ -0.66
MATR3-227ENST00000618441 CSNK2A3Q8NEV1 391 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 RCC1LQ96I51 464 aaKnown RBP10.9□□□□□ -0.66
MATR3-227ENST00000618441 BTF3L4Q96K17 158 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 WDR76Q9H967 626 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 OR5G3P0C626 314 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 GLIPR1P48060 266 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 TAF9Q16594 264 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 MEP1BQ16820 701 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 OR13C3Q8NGS6 347 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 PRSS27Q9BQR3 290 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 BANF2Q9H503 90 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 EHFQ9NZC4 300 aa10.9□□□□□ -0.66
MATR3-227ENST00000618441 POLR3KQ9Y2Y1 108 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms