RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SRMP19623 302 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 FSTP19883 344 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 BDKRB2P30411 391 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 HAAOP46952 286 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 RBP2P50120 134 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 PDLIM4P50479 330 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 HAGHLQ6PII5 290 aaPredicted RBP13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 LHFPL2Q6ZUX7 228 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 RNF144BQ7Z419 303 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 SATL1Q86VE3 508 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 OR52N4Q8NGI2 321 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 OR13F1Q8NGS4 319 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 OR11L1Q8NGX0 322 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 CHCHD6Q9BRQ6 235 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 TLNRD1Q9H1K6 362 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 TCF7L1Q9HCS4 588 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 TMEM138Q9NPI0 162 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 TMEM106BQ9NUM4 274 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 ITGB1BP2Q9UKP3 347 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 hCG_1807616A0A1W2PRN6 198 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 CYSRT1A8MQ03 144 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 RP2O75695 350 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 ARL6IP5O75915 188 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 CYB5R3P00387 301 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 ALDOBP05062 364 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 GALP22466 123 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 RPL5P46777 297 aaKnown RBP13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 ART1P52961 327 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 C22orf42Q6IC83 251 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 CALHM1Q8IU99 346 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 Q8TCH9 128 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 RFT1Q96AA3 541 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 FOXC2Q99958 501 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 SLITRK2Q9H156 845 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 METTL17Q9H7H0 456 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 CHODLQ9H9P2 273 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 TXNL4BQ9NX01 149 aaKnown RBP13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 RNF7Q9UBF6 113 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 ITPR2Q14571 2701 aa13.17□□□□□ -0.3
PCDHGC3-204ENST00000617222 LOC100506127A0A0U1RQW1 187 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 TRIM64BA6NI03 449 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 LRRC30A6NM36 301 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 TMEM178BH3BS89 294 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 IFNL4K9M1U5 179 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 SYNGR1O43759 233 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 RHBDL1O75783 438 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 PLATP00750 562 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 IRF2P14316 349 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 POU3F4P49335 361 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 TMEM33P57088 247 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 KISS1Q15726 138 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 CLEC12BQ2HXU8 276 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 Q5PR19 223 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 DDI2Q5TDH0 399 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 CLEC2AQ6UVW9 174 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 WDR82Q6UXN9 313 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 GPR141Q7Z602 305 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 LRRTM1Q86UE6 522 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 BOLLQ8N9W6 283 aaKnown RBP13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF671Q8TAW3 534 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 LRRC29Q8WV35 223 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 AQP3Q92482 292 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 FAM168AQ92567 244 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 HPS1Q92902 700 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 NKX3-1Q99801 234 aaPredicted RBP13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 FUNDC2Q9BWH2 189 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 GSTK1Q9Y2Q3 226 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 TACC2O95359 2948 aa13.16□□□□□ -0.3
PCDHGC3-204ENST00000617222 MEGF11A6BM72 1044 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 J3QT63 122 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 AIREO43918 545 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF205O95201 554 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 CSF3P09919 207 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 ADRA2CP18825 462 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 FGF9P31371 208 aaPredicted RBP13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 DSCR9P59020 149 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF181Q2M3W8 571 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 FAM201AQ5SY85 155 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 CRIP3Q6Q6R5 217 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 PRSS57Q6UWY2 283 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 OR5D18Q8NGL1 313 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 GPER1Q99527 375 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 PKIBQ9C010 78 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 RNF167Q9H6Y7 350 aa13.15□□□□□ -0.3
PCDHGC3-204ENST00000617222 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 AKR7A2O43488 359 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 SPRY1O43609 319 aaPredicted RBP13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 LHBP01229 141 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 TMEM225BP0DP42 221 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 MYL9P24844 172 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 MPZP25189 248 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 ZNF93P35789 620 aaPredicted RBP13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 CFHR2P36980 270 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms