RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 BET1LQ9NYM9 111 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 PPIL1Q9Y3C6 166 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 F5P12259 2224 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 DUXBA0A1W2PPF3 345 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 LINC01553A4QN01 128 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 FFAR1O14842 300 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 DAOP14920 347 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 CD27P26842 260 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 CDKN2AP42771 156 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 SULT1A1P50225 295 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 JMJD6Q6NYC1 403 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 SLC26A10Q8NG04 563 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 PTP4A1Q93096 173 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 DNAJB12Q9NXW2 375 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 M0QZK8 103 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 MFNGO00587 321 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 ADAM20O43506 726 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 GATCO43716 136 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 GGCTO75223 188 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 CER1O95813 267 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 SURF2Q15527 256 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 TMEM104Q8NE00 496 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 OR10G3Q8NGC4 313 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 M1APQ8TC57 530 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 Q9N2K0 584 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF275Q9NSD4 429 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 TTC3P53804 2025 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 SERTM2A0A1B0GWG4 89 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 MED19A0JLT2 244 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 LRRC30A6NM36 301 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 B4DEV8 164 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF737O75373 536 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 SEMG1P04279 462 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 FBP1P09467 338 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 TM4SF4P48230 202 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 LIMK1P53667 647 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 FOXF1Q12946 379 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF273Q14593 569 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 RTL8BQ17RB0 113 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 LINC00696Q6ZRV3 163 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 BHLHA9Q7RTU4 235 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 NHLRC2Q8NBF2 726 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 IL22RA2Q969J5 263 aa9.54□□□□□ -0.88
CLTCL1-209ENST00000617103 FCN1O00602 326 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 BSXQ3C1V8 233 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 FFAR4Q5NUL3 377 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 OVCH2Q7RTZ1 564 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 GVQW1Q8N7I0 195 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ADPRHL1Q8NDY3 354 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 OR2T10Q8NGZ9 312 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF107Q9UII5 783 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ERVH48-1M5A8F1 160 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CNIH1O95406 144 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CLEC3BP05452 202 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CDAP32320 146 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CAPZBP47756 277 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 SLC38A11Q08AI6 406 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 FBXO46Q6PJ61 603 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 AMER3Q8N944 861 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 SCCPDHQ8NBX0 429 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ROBO4Q8WZ75 1007 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 TRIB1Q96RU8 372 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 RAB33BQ9H082 229 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 IL21Q9HBE4 155 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CCL27Q9Y4X3 112 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 C3orf85A0A1B0GTC6 90 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 KIAA1324LA8MWY0 1029 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CDRT15L2A8MXV6 281 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 LY86O95711 162 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CHRNA7P36544 502 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF154Q13106 437 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 TSEN54Q7Z6J9 526 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 TMEM178AQ8NBL3 297 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 GALMQ96C23 342 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CNTD2Q9H8S5 307 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 AMDHD2Q9Y303 409 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 GPR37O15354 613 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 TOX3O15405 576 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 LANCL1O43813 399 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CXCL13O43927 109 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 KRASP01116 189 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 NDUFB7P17568 137 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 PKIAP61925 76 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 TIAL1Q01085 375 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 DMWDQ09019 674 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF345Q14585 488 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 CLEC18BQ6UXF7 455 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 LIMS2Q7Z4I7 341 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 SLC25A42Q86VD7 318 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 ZNF383Q8NA42 475 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 SIRT7Q9NRC8 400 aa9.53□□□□□ -0.88
CLTCL1-209ENST00000617103 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.88
CLTCL1-209ENST00000617103 IFITM2Q01629 132 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 TMEM267Q0VDI3 215 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 IL24Q13007 206 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms