RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ZNF782Q6ZMW2 699 aaPredicted RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 RFPL4BQ6ZWI9 263 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 C6orf201Q7Z4U5 140 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 TRAPPC6BQ86SZ2 158 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 LIX1LQ8IVB5 337 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 SLC30A7Q8NEW0 376 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 OR52B4Q8NGK2 314 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 GIMAP1Q8WWP7 306 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 PP6455Q8WZ26 134 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 HS3ST6Q96QI5 342 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 S100A13Q99584 98 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 CHST6Q9GZX3 395 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 C20orf85Q9H1P6 137 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ITGB1BP2Q9UKP3 347 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ZNF175Q9Y473 711 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 POLEQ07864 2286 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 IGKV1-12A0A0C4DH73 117 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 TNFSF13O75888 250 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ZNF205O95201 554 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 IGKV1D-12P01611 117 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 SFTPBP07988 381 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 APLNRP35414 380 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 RAD52P43351 418 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 NPBWR2P48146 333 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 TBR1Q16650 682 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 PIGYQ3MUY2 71 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 CXorf67Q86X51 503 aaPredicted RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 PNLDC1Q8NA58 520 aaKnown RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 OR10R2Q8NGX6 335 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 PPP1R35Q8TAP8 253 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 GPX8Q8TED1 209 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 CREB3L1Q96BA8 519 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 STARD4Q96DR4 205 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 BORCS8Q96FH0 119 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 SEC22CQ9BRL7 303 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 HDHD3Q9BSH5 251 aaPredicted RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 FGF23Q9GZV9 251 aaPredicted RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 FAM215AQ9Y5M1 114 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ARID1AO14497 2285 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 OR6C65A6NJZ3 312 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 F8VVB4 439 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 F8VWA3 439 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 PYCARD-AS1I3L0S3 204 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ATP6V1G1O75348 118 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 PRF1P14222 555 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 CXCL3P19876 107 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 PSMB1P20618 241 aaKnown RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 BLVRBP30043 206 aaPredicted RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 PTGER4P35408 488 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 SCAND1P57086 179 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 UBE2NP61088 152 aaKnown RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 CXADRP78310 365 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 DYRK1AQ13627 763 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ST3GAL2Q16842 350 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 CLVS2Q5SYC1 327 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 C17orf107Q6ZR85 190 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 MRPL21Q7Z2W9 205 aaKnown RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 KCNG3Q8TAE7 436 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 CAPSLQ8WWF8 208 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 RAB3CQ96E17 227 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ST6GALNAC5Q9BVH7 336 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 TINAGQ9UJW2 476 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 FIGNL2A6NMB9 653 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 SSX5O60225 188 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 ECDO95905 644 aaPredicted RBP6.71□□□□□ -1.33
NEK3-207ENST00000617054 PMP2P02689 132 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 RLN1P04808 185 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 ARR3P36575 388 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 RBP2P50120 134 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 FCN2Q15485 313 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 GABRA6Q16445 453 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 STEAP1BQ6NZ63 245 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 COLCA1Q6ZS62 124 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 Q6ZT83 130 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 GABRG1Q8N1C3 465 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 Q8NA96 180 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 UXS1Q8NBZ7 420 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 AQP3Q92482 292 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 WBP1Q96G27 269 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 ZNF75AQ96N20 296 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 GINS4Q9BRT9 223 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 OR2J1Q9GZK6 312 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 IL36RNQ9UBH0 155 aa6.71□□□□□ -1.33
NEK3-207ENST00000617054 HMX3A6NHT5 357 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 SERPINA5P05154 406 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 LPLP06858 475 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 CA6P23280 308 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 DUSP1P28562 367 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 HAAOP46952 286 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 RSU1Q15404 277 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 NRN1LQ496H8 165 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 TMEM53Q6P2H8 277 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 DNM1P46Q6ZS02 220 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 C22orf34Q6ZV56 151 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 C5orf24Q7Z6I8 188 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 OR51F2Q8NH61 342 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 WDR89Q96FK6 387 aaPredicted RBP6.71□□□□□ -1.34
NEK3-207ENST00000617054 ZNF488Q96MN9 340 aa6.71□□□□□ -1.34
NEK3-207ENST00000617054 K7ENP7 123 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms