RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 OR5M1Q8NGP8 315 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 FAM216AQ8WUB2 273 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 VWCEQ96DN2 955 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 NKX3-1Q99801 234 aaPredicted RBP7.78□□□□□ -1.16
PDE6A-204ENST00000613228 MENTQ9BUN1 341 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 SMIM3Q9BZL3 60 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 SLC25A31Q9H0C2 315 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 FBXO34Q9NWN3 711 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 C7orf66A4D0T2 115 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 LIPT2A6NK58 231 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 A8MXK9 166 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 SLC17A2O00624 439 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 CTDSPLO15194 276 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 TRAF3IP2O43734 574 aaPredicted RBP7.78□□□□□ -1.16
PDE6A-204ENST00000613228 CLN5O75503 358 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 SCGB2A1O75556 95 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 ACAA2P42765 397 aaKnown RBP7.78□□□□□ -1.16
PDE6A-204ENST00000613228 OR3A1P47881 315 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 HFEQ30201 348 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 NHLRC3Q5JS37 347 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 DMKNQ6E0U4 476 aaPredicted RBP7.78□□□□□ -1.16
PDE6A-204ENST00000613228 SPNS3Q6ZMD2 512 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 C9orf40Q8IXQ3 194 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 NUDCD2Q8WVJ2 157 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 CYSLTR2Q9NS75 346 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 EHFQ9NZC4 300 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 TCFL5Q9UL49 500 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 PROCRQ9UNN8 238 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 SLC22A13Q9Y226 551 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 RHBDD3Q9Y3P4 386 aa7.78□□□□□ -1.16
PDE6A-204ENST00000613228 A0A1W2PNR3 127 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 XRCC3O43542 346 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 FABP6P51161 128 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 MLF1P58340 268 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 LSM6P62312 80 aaKnown RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 DRAM2Q6UX65 266 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 THNSL2Q86YJ6 484 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 PUSL1Q8N0Z8 303 aaKnown RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 C11orf42Q8N5U0 333 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 ZNF709Q8N972 641 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 HSD17B11Q8NBQ5 300 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 OR2D3Q8NGH3 330 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 MITD1Q8WV92 249 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 C11orf40Q8WZ69 217 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 DYRK2Q92630 601 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 ZG16BQ96DA0 208 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 NICN1Q9BSH3 213 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 PARD6GQ9BYG4 376 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 RIMS4Q9H426 269 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 OBP2BQ9NPH6 170 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 LANCL2Q9NS86 450 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 POLDIP2Q9Y2S7 368 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 SOX18P35713 384 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 TRIP6Q15654 476 aaKnown RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 NKPD1Q17RQ9 610 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 ZNF528Q3MIS6 628 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 C11orf87Q6NUJ2 197 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 TOMM20LQ6UXN7 152 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 LDLRAD3Q86YD5 345 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 OR51E1Q8TCB6 317 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 SPSB1Q96BD6 273 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 SAT2Q96F10 170 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 OCIAD1Q9NX40 245 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 LRP12Q9Y561 859 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 SLC22A20A6NK97 555 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 FAM166BA8MTA8 275 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 CDC42EP2O14613 210 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 PLA2G10O15496 165 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 CXCL13O43927 109 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 GPR137BO60478 399 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 TSPAN2O60636 221 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 ACTL6AO96019 429 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 TFF2Q03403 129 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 EXOSC6Q5RKV6 272 aaKnown RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 ANGPTL5Q86XS5 388 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 TMEM229BQ8NBD8 167 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 TMEM52Q8NDY8 209 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 LIPHQ8WWY8 451 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 GTF3AQ92664 365 aaKnown RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 SELENOIQ9C0D9 397 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 MRPL22Q9NWU5 206 aaKnown RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 FLVCR2Q9UPI3 526 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 CSAG2Q9Y5P2 127 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 KIR2DS1A0A191URI9 304 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 AQP7P3A6NL99 342 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 GCM2O75603 506 aaPredicted RBP7.77□□□□□ -1.17
PDE6A-204ENST00000613228 MYF5P13349 255 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 KIR2DS4P43632 304 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 FUT5Q11128 374 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 KIR2DS1Q14954 304 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 PCK2Q16822 640 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 PRSS53Q2L4Q9 553 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 C4orf17Q53FE4 359 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 SMIM4Q8WVI0 70 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 REEP6Q96HR9 211 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 C4orf45Q96LM5 186 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 RASL10BQ96S79 203 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 NLRC5Q86WI3 1866 aa7.77□□□□□ -1.17
PDE6A-204ENST00000613228 A0A1B0GWJ7 208 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms