RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SAMD4AQ9UPU9 718 aaKnown RBP13.82□□□□□ -0.2
CSNK1E-215ENST00000612795 CST4P01036 141 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 ACKR3P25106 362 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 GSSP48637 474 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 OR12D2P58182 307 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 SF3A3Q12874 501 aaKnown RBP eCLIP13.81□□□□□ -0.22e-7■■■■■ 27.2
CSNK1E-215ENST00000612795 ZNF273Q14593 569 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 KLHL22Q53GT1 634 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 TCTEX1D4Q5JR98 221 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 TEX30Q5JUR7 227 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 RPL13AP3Q6NVV1 102 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 OR13D1Q8NGV5 346 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 OR2T27Q8NH04 317 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 ZNF671Q8TAW3 534 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 CDH10Q9Y6N8 788 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 V9GYQ6 96 aa13.81□□□□□ -0.2
CSNK1E-215ENST00000612795 C3orf84H3BNL1 204 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 H3BUI4 141 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 NHLRC4P0CG21 123 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 PIPP12273 146 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 GNG3P63215 75 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 TSPAN31Q12999 210 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 DYNC1I2Q13409 638 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 CRMP1Q14194 572 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 SMIM21Q3B7S5 101 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 ZNF561Q8N587 486 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 OR6N2Q8NGY6 317 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 GNPDA2Q8TDQ7 276 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 PCDHGB5Q9Y5G0 923 aa13.8□□□□□ -0.2
CSNK1E-215ENST00000612795 RFPL4AA6NLU0 287 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 ODF3BA8MYP8 253 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 ZNF732B4DXR9 585 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 RFPL4AL1F8VTS6 287 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 CHRM2P08172 466 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 H2BFMP0C1H6 154 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 SPI1P17947 270 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 NUDT2P50583 147 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 DYNLT3P51808 116 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 BLVRAP53004 296 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 SLC34A1Q06495 639 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 ZNF626Q68DY1 528 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 ERI1Q8IV48 349 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 LINC00482Q8N8I6 264 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 FAM81AQ8TBF8 368 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 RNF133Q8WVZ7 376 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 HOPXQ9BPY8 73 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 ABHD6Q9BV23 337 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 OR51I2Q9H344 312 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 TBC1D23Q9NUY8 699 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
CSNK1E-215ENST00000612795 NDUFAB1O14561 156 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 GMNNO75496 209 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 MTRF1O75570 445 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 CCDC159P0C7I6 412 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 CLUP10909 449 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 LMO1P25800 156 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 CEBPDP49716 269 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 CEP78Q5JTW2 689 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 HAGHLQ6PII5 290 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 ACP7Q6ZNF0 438 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 CALHM1Q8IU99 346 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 LINC00471Q8N535 108 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 CD177Q8N6Q3 437 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 RP9Q8TA86 221 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 CAPSLQ8WWF8 208 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 AKR1E2Q96JD6 320 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 INTS14Q96SY0 518 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 DCAF13Q9NV06 445 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 RASL12Q9NYN1 266 aa13.78□□□□□ -0.2
CSNK1E-215ENST00000612795 DYNC2H1Q8NCM8 4307 aaKnown RBP13.77□□□□□ -0.2
CSNK1E-215ENST00000612795 C17orf98A8MV24 154 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 JUNBP17275 347 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 RRM2P31350 389 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 LDLRAD2Q5SZI1 272 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 GLYATQ6IB77 296 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 PIGWQ7Z7B1 504 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 OR51D1Q8NGF3 324 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 NDNFQ8TB73 568 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 AQP3Q92482 292 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 ZNF649Q9BS31 505 aa13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 MCRIP2Q9BUT9 160 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-215ENST00000612795 HMGB1P1B2RPK0 211 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 SLC22A2O15244 555 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 PRDX2P32119 198 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 OPRL1P41146 370 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 CEACAM21Q3KPI0 293 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 UNQ9370/PRO34162Q6UXP9 181 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 C16orf82Q7Z2V1 217 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 OR11H6Q8NGC7 330 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 MCUR1Q96AQ8 359 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 LYZL4Q96KX0 146 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 AMELYQ99218 206 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 NMNAT2Q9BZQ4 307 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 ZMAT5Q9UDW3 170 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 OR14J1Q9UGF5 321 aa13.76□□□□□ -0.21
CSNK1E-215ENST00000612795 MEX3AA1L020 520 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms