RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 SHISA6Q6ZSJ9 500 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 CSNK2A3Q8NEV1 391 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 PTPMT1Q8WUK0 201 aaPredicted RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 THRSPQ92748 146 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 PRRX2Q99811 253 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 H3BML4 177 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 H3BQ15 152 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SLC33A1O00400 549 aaPredicted RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 GEMIN2O14893 280 aaKnown RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 HCKP08631 526 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SLC35A1P78382 337 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 C1orf140Q5VVS0 124 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 OR13G1Q8NGZ3 307 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 FNDC9Q8TBE3 224 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 MUCL1Q96DR8 90 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 RTBDNQ9BSG5 229 aaPredicted RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 ADAM19Q9H013 955 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 LPAR5Q9H1C0 372 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 DUSP15Q9H1R2 295 aaPredicted RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDH4-202ENST00000611855 POLR1DQ9Y2S0 133 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SLCO1B1Q9Y6L6 691 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 LINC01553A4QN01 128 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 IL33O95760 270 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 IFNA10P01566 189 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 NTSR1P30989 418 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 APLNRP35414 380 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SLC37A1P57057 533 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SLC26A5P58743 744 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 RAB1AP62820 205 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SGCBQ16585 318 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SP6Q3SY56 376 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 PHF19Q5T6S3 580 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 SLC22A24Q8N4F4 322 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 REEP6Q96HR9 211 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 ELL3Q9HB65 397 aaPredicted RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 ZNF701Q9NV72 531 aaPredicted RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 PRODH2Q9UF12 536 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 VDAC3Q9Y277 283 aa9.74□□□□□ -0.85
CDH4-202ENST00000611855 MRPS28Q9Y2Q9 187 aaKnown RBP9.74□□□□□ -0.85
CDH4-202ENST00000611855 A0A1W2PQF6 199 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 SRSF10O75494 262 aaKnown RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 IL2RGP31785 369 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 CDAP32320 146 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 AFF3P51826 1226 aaKnown RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 TMEM50BP56557 158 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 CCL20P78556 96 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 PRTGQ2VWP7 1150 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 OPN5Q6U736 354 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 ABHD12BQ7Z5M8 362 aaPredicted RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 LRP11Q86VZ4 500 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 SLC22A18ASQ8N1D0 253 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 FRZBQ92765 325 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 SHANK1Q9Y566 2161 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 BORCS7-ASMTA0A0B4J1R7 106 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 ZNF878C9JN71 531 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 NPIPA5E9PKD4 350 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 PLPP3O14495 311 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 EREGO14944 169 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 NUDT21O43809 227 aaKnown RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 ZNF20P17024 532 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 EN2P19622 333 aaPredicted RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 DLK1P80370 383 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 QRFPP83859 136 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 CARD17Q5XLA6 110 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 PEG10Q86TG7 708 aaKnown RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 ZFP62Q8NB50 900 aaPredicted RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 MRPL24Q96A35 216 aaKnown RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 GALNT14Q96FL9 552 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 ABHD14AQ9BUJ0 271 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 PBOV1Q9GZY1 135 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 VSX1Q9NZR4 365 aaPredicted RBP9.73□□□□□ -0.85
CDH4-202ENST00000611855 NPIPA1Q9UND3 350 aa9.73□□□□□ -0.85
CDH4-202ENST00000611855 AHSA1O95433 338 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 MBP02144 154 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 PGA4P0DJD7 388 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 PGA5P0DJD9 388 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 HNRNPA2B1P22626 353 aaKnown RBP9.72□□□□□ -0.85
CDH4-202ENST00000611855 ELOBQ15370 118 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 TCEAL6Q6IPX3 200 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 FAM180AQ6UWF9 173 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 LYPD6Q86Y78 171 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 NKAIN3Q8N8D7 197 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 SLAMF6Q96DU3 332 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 C5orf34Q96MH7 638 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 C8orf33Q9H7E9 229 aaPredicted RBP9.72□□□□□ -0.85
CDH4-202ENST00000611855 BCO1Q9HAY6 547 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 LOC390937A0A1W2PQ73 354 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 TNFSF12O43508 249 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 CTSEP14091 401 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 ZNF25P17030 456 aaPredicted RBP9.72□□□□□ -0.85
CDH4-202ENST00000611855 OMGP23515 440 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 SNU13P55769 128 aaKnown RBP9.72□□□□□ -0.85
CDH4-202ENST00000611855 GFERP55789 205 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 PLCXD2Q0VAA5 305 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 KLHL24Q6TFL4 600 aa9.72□□□□□ -0.85
CDH4-202ENST00000611855 C1QL4Q86Z23 238 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms