RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 CFL1P23528 166 aaKnown RBP9.76□□□□□ -0.85
LINC00539-204ENST00000608957 GCH1P30793 250 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 ZNF81P51508 661 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 OR10A3P58181 314 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 SELENOVP59797 346 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 LMO4P61968 165 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 PSG7Q13046 419 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 CEP78Q5JTW2 689 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 GLYATL3Q5SZD4 288 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 FAM120AOSQ5T036 256 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 Q6ZR03 302 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 CROCCP3Q8IVE0 287 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 PLPP7Q8NBV4 271 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 TBC1D15Q8TC07 691 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 AP3S1Q92572 193 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 HPS1Q92902 700 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 REEP6Q96HR9 211 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 LYZL4Q96KX0 146 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 C1QTNF5Q9BXJ0 243 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 C6orf62Q9GZU0 229 aaPredicted RBP9.76□□□□□ -0.85
LINC00539-204ENST00000608957 MMP27Q9H306 513 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 RGCCQ9H4X1 137 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 SMURF1Q9HCE7 757 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 MSL2Q9HCI7 577 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 TBCCD1Q9NVR7 557 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 DCAF16Q9NXF7 216 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 TAS2R4Q9NYW5 299 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 TREM2Q9NZC2 230 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 CKLFQ9UBR5 152 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 ZNF391Q9UJN7 358 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 FOXJ3Q9UPW0 622 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 ATRQ13535 2644 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 A0A075B6Q4 140 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 TRAV8-7A0A075B6U6 113 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 A0A0G2JK05 382 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 IGHV1-69-2A0A0G2JMI3 117 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 NOTOA8MTQ0 251 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 PPIHO43447 177 aaKnown RBP9.75□□□□□ -0.85
LINC00539-204ENST00000608957 XRCC2O43543 280 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 DHRS3O75911 302 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 ADH4P08319 380 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 ZNF20P17024 532 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 TMEM33P57088 247 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 CR1LQ2VPA4 569 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 PCGF3Q3KNV8 242 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 AVPI1Q5T686 147 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 ASPHD2Q6ICH7 369 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 SFXN4Q6P4A7 337 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 COLCA1Q6ZS62 124 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 LINC00299Q6ZSB3 139 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 Q6ZSR3 168 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 LRRTM1Q86UE6 522 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 NR2C2APQ86WQ0 139 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 PARP16Q8N5Y8 322 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 LINC01356Q8N9X3 169 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 OR14K1Q8NGZ2 314 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 BEX2Q9BXY8 128 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 SHARPINQ9H0F6 387 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 PLEKHA1Q9HB21 404 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 GPR160Q9UJ42 338 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 PURGQ9UJV8 347 aaKnown RBP9.75□□□□□ -0.85
LINC00539-204ENST00000608957 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
LINC00539-204ENST00000608957 V9GYS6 101 aa9.75□□□□□ -0.85
LINC00539-204ENST00000608957 ANXA2P2A6NMY6 339 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 DHRS7CA6NNS2 312 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 MTRF1O75570 445 aaKnown RBP9.74□□□□□ -0.85
LINC00539-204ENST00000608957 MAS1P04201 325 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 IGFBP3P17936 291 aaPredicted RBP9.74□□□□□ -0.85
LINC00539-204ENST00000608957 ADRA2CP18825 462 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 KITLGP21583 273 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 PPP3R1P63098 170 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 SRSF2Q01130 221 aaKnown RBP9.74□□□□□ -0.85
LINC00539-204ENST00000608957 FAM209AQ5JX71 171 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 SERPINA12Q8IW75 414 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 OR6Q1Q8NGQ2 317 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 OR2AE1Q8NHA4 323 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 APOBEC3DQ96AK3 386 aaPredicted RBP9.74□□□□□ -0.85
LINC00539-204ENST00000608957 SGK3Q96BR1 496 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 FGGYQ96C11 551 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
LINC00539-204ENST00000608957 CMBLQ96DG6 245 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 ADAT3Q96EY9 351 aaPredicted RBP9.74□□□□□ -0.85
LINC00539-204ENST00000608957 GFI1Q99684 422 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 SAP30LQ9HAJ7 183 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 LPAR3Q9UBY5 353 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 WIPI2Q9Y4P8 454 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 DNHD1Q96M86 4753 aa9.74□□□□□ -0.85
LINC00539-204ENST00000608957 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 ANKRD61A6NGH8 418 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 AIPO00170 330 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 TIMM8AO60220 97 aaPredicted RBP9.73□□□□□ -0.85
LINC00539-204ENST00000608957 CD55P08174 381 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 GNALP38405 381 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 PSMD7P51665 324 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 DYNC1I2Q13409 638 aaKnown RBP9.73□□□□□ -0.85
LINC00539-204ENST00000608957 HLXQ14774 488 aaPredicted RBP9.73□□□□□ -0.85
LINC00539-204ENST00000608957 MOGQ16653 247 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 IDNKQ5T6J7 187 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 UNQ6126/PRO20091Q6UXV3 157 aa9.73□□□□□ -0.85
LINC00539-204ENST00000608957 PGAP1Q75T13 922 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms