RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 A0A1W2PQ09 198 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 TCRBV3S1A0A5B6 114 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 MEIOCA2RUB1 952 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 PRR32B1ATL7 298 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 M0QZ24 198 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 GYG2O15488 501 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 GSC2O15499 205 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 FKBP6O75344 327 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 ZNF254O75437 659 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 TSPAN9O75954 239 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 NRASP01111 189 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 MRPL3P09001 348 aaKnown RBP6.23□□□□□ -1.41
CUX1-219ENST00000606749 SAA4P35542 130 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 TGFBR2P37173 567 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 DAPP51397 102 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 EFNB1P98172 346 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 ACSM1Q08AH1 577 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 RIPPLY1Q0D2K3 151 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 BLMHQ13867 455 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 PTGES3Q15185 160 aaKnown RBP6.23□□□□□ -1.41
CUX1-219ENST00000606749 MIDNQ504T8 468 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 NCR3LG1Q68D85 454 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 HCP5Q6MZN7 132 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 THAP5Q7Z6K1 395 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 SPATA24Q86W54 205 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 ZNF679Q8IYX0 411 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 OR51E1Q8TCB6 317 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 ASB17Q8WXJ9 295 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 AQP3Q92482 292 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 NRBF2Q96F24 287 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 SDSLQ96GA7 329 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 OR8B4Q96RC9 309 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 RBM4BQ9BQ04 359 aaKnown RBP6.23□□□□□ -1.41
CUX1-219ENST00000606749 METTL8Q9H825 291 aaKnown RBP6.23□□□□□ -1.41
CUX1-219ENST00000606749 ELL3Q9HB65 397 aaPredicted RBP6.23□□□□□ -1.41
CUX1-219ENST00000606749 GPR84Q9NQS5 396 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 PAPOLBQ9NRJ5 636 aaKnown RBP6.23□□□□□ -1.41
CUX1-219ENST00000606749 RASL12Q9NYN1 266 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 ZNF222Q9UK12 451 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 VPREB3Q9UKI3 123 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 COPS3Q9UNS2 423 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 POMPQ9Y244 141 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 PIGLQ9Y2B2 252 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 BOLA1Q9Y3E2 137 aa6.23□□□□□ -1.41
CUX1-219ENST00000606749 BTBD17A6NE02 478 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 OR5B21A6NL26 309 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 RFPL4AA6NLU0 287 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 RFPL4AL1F8VTS6 287 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 PRKYO43930 277 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 SRSF10O75494 262 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 MTRF1O75570 445 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 PAHP00439 452 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 TTRP02766 147 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 FAHP16930 419 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 RIDAP52758 137 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 MFGE8Q08431 387 aaPredicted RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 FLOT2Q14254 428 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 DNAL1Q4LDG9 190 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 ZBTB37Q5TC79 503 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 PLCXD3Q63HM9 321 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 TMEM42Q69YG0 159 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 DHRS7BQ6IAN0 325 aaPredicted RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 SLC35E4Q6ICL7 350 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 FAHD1Q6P587 224 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 HAGHLQ6PII5 290 aaPredicted RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 ACP7Q6ZNF0 438 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 MEPCEQ7L2J0 689 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 BCDIN3DQ7Z5W3 292 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 COMMD2Q86X83 199 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 CD177Q8N6Q3 437 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 BEND2Q8NDZ0 799 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 OR5D13Q8NGL4 314 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 OR5R1Q8NH85 324 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 C17orf50Q8WW18 174 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 DNAJC9Q8WXX5 260 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 UTP4Q969X6 686 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 SLC7A6OSQ96CW6 309 aaPredicted RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 AJUBAQ96IF1 538 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 APOL4Q9BPW4 351 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 MMP27Q9H306 513 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 TCF7L1Q9HCS4 588 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 H2AFY2Q9P0M6 372 aaPredicted RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 NUFIP1Q9UHK0 495 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 ENPP5Q9UJA9 477 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 SF3B6Q9Y3B4 125 aaKnown RBP6.22□□□□□ -1.41
CUX1-219ENST00000606749 TMEM14AQ9Y6G1 99 aa6.22□□□□□ -1.41
CUX1-219ENST00000606749 TRBV23-1A0A0A0MS06 115 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 PQLC2LA1A4F0 135 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ANKRD61A6NGH8 418 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 H0YAE9 185 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 DLGAP1O14490 977 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 MAGEB4O15481 346 aaPredicted RBP6.21□□□□□ -1.42
CUX1-219ENST00000606749 SYNGR1O43759 233 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 NOS1APO75052 506 aaPredicted RBP6.21□□□□□ -1.42
CUX1-219ENST00000606749 DHRS3O75911 302 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 DNAJC8O75937 253 aaPredicted RBP6.21□□□□□ -1.42
CUX1-219ENST00000606749 EPHA2P29317 976 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 PRDX2P32119 198 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 HAAOP46952 286 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ERVFRD-1P60508 538 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms