RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 TCTAP57738 103 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 PRR5P85299 388 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 RUNX1Q01196 453 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 CDH18Q13634 790 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 RBM39Q14498 530 aaKnown RBP5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 NPY5RQ15761 445 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 TMEM215Q68D42 235 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 C22orf42Q6IC83 251 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 Q6ZVL8 140 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 FA2HQ7L5A8 372 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 TMEM173Q86WV6 379 aaPredicted RBP5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 ZNF440Q8IYI8 595 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 ACOT4Q8N9L9 421 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 ASB13Q8WXK3 278 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 LINC00477Q96M19 166 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 CCDC115Q96NT0 180 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 PKMYT1Q99640 499 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 TXNIPQ9H3M7 391 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 NOX4Q9NPH5 578 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 MED29Q9NX70 200 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 IGSF9BQ9UPX0 1349 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 WDR27A2RRH5 827 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 NPIPB6E9PJ23 425 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 C15orf65H3BRN8 121 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 MSTNO14793 375 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 ERI3O43414 337 aaKnown RBP5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 KLF8O95600 359 aaPredicted RBP5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 SEMG1P04279 462 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 AMY1AP04745 511 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 LIMS3P0CW19 117 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 LIMS4P0CW20 117 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 C8orf88P0DMB2 117 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 RPL7P18124 248 aaKnown RBP5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 KIR2DL3P43628 341 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 SELENOWP63302 87 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 HHEXQ03014 270 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 DCAF4L1Q3SXM0 396 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 TDRG1Q3Y452 100 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 ZNF485Q8NCK3 441 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR4L1Q8NH43 312 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR5B3Q8NH48 314 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 LMO3Q8TAP4 145 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 TMEM174Q8WUU8 243 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 FAM151AQ8WW52 585 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 PYCR2Q96C36 320 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 DNAJC30Q96LL9 226 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 C20orf27Q9GZN8 174 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 LACRTQ9GZZ8 138 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 PHPT1Q9NRX4 125 aaPredicted RBP5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 GPATCH2LQ9NWQ4 482 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 TRAPPC2LQ9UL33 140 aa5.08□□□□□ -1.6
COL4A3BP-207ENST00000604926 A0A0G2JLM5 398 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 KIR2DS5A0A0G2JLQ3 304 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 A0A0G2JNG1 304 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR5B21A6NL26 309 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 CYBAP13498 195 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 ARRB2P32121 409 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 KIR2DS5Q14953 304 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 TAL2Q16559 108 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 TBR1Q16650 682 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 CTU2Q2VPK5 515 aaKnown RBP5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 DOK3Q7L591 496 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 CHST4Q8NCG5 386 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR8G5Q8NG78 346 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR4K5Q8NGD3 323 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 ZNF519Q8TB69 540 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 SCAMP4Q969E2 229 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 NEIL2Q969S2 332 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 OXGR1Q96P68 337 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 GFM1Q96RP9 751 aaKnown RBP5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 HIST1H2BLQ99880 126 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 PSMG3Q9BT73 122 aaPredicted RBP5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 TAPBPLQ9BX59 468 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 C1QTNF4Q9BXJ3 329 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 ZNF222Q9UK12 451 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 PCYT1BQ9Y5K3 369 aaPredicted RBP5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 LRP5LA4QPB2 252 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR4C46A6NHA9 309 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 CD160O95971 181 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 CD1AP06126 327 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 RPL12P30050 165 aaKnown RBP5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 CX3CR1P49238 355 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR12D2P58182 307 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 SRSF4Q08170 494 aaKnown RBP5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 TIGITQ495A1 244 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 GLT8D1Q68CQ7 371 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 TOMM20LQ6UXN7 152 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 ADAMTSL5Q6ZMM2 481 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 BEST3Q8N1M1 668 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 OR13C6PQ8NH95 151 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 FBXO25Q8TCJ0 367 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 S100A13Q99584 98 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 A4GALTQ9NPC4 353 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 ASB6Q9NWX5 421 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 FBXO4Q9UKT5 387 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 ENPP4Q9Y6X5 453 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 PLXNA1Q9UIW2 1896 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 LOXHD1Q8IVV2 1947 aa5.07□□□□□ -1.6
COL4A3BP-207ENST00000604926 PRSS51A0A1B0GVH4 220 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms