RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RAB12Q6IQ22 244 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 C1QL2Q7Z5L3 287 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 CDH24Q86UP0 819 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 URM1Q9BTM9 101 aaKnown RBP15.4■□□□□ 0.06
VRK3-225ENST00000601912 RTL8AQ9BWD3 113 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 TMEM59Q9BXS4 323 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 ESRP2Q9H6T0 727 aaKnown RBP15.4■□□□□ 0.06
VRK3-225ENST00000601912 PCDHB16Q9NRJ7 776 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 FZR1Q9UM11 496 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 IGSF10Q6WRI0 2623 aa15.4■□□□□ 0.06
VRK3-225ENST00000601912 KALRNO60229 2985 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 DPRXA6NFQ7 191 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 ABCD4O14678 606 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 CDC14BO60729 498 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 KDM4BO94953 1096 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 MPIG6BO95866 241 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 PLATP00750 562 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 CSTBP04080 98 aaKnown RBP15.39■□□□□ 0.05
VRK3-225ENST00000601912 IL7P13232 177 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 ZNF250P15622 560 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 AGAP20933 346 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 MNDAP41218 407 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 SELENOVP59797 346 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 IFITM3Q01628 133 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 BSPH1Q075Z2 132 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 RSU1Q15404 277 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 BAK1Q16611 211 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 ALKBH6Q3KRA9 238 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 TRIQKQ629K1 86 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 STEAP3Q658P3 488 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 SLC22A25Q6T423 547 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 LYSMD2Q8IV50 215 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 ZSCAN4Q8NAM6 433 aaPredicted RBP15.39■□□□□ 0.05
VRK3-225ENST00000601912 NUP37Q8NFH4 326 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 PXT1Q8NFP0 134 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 DVL3Q92997 716 aaPredicted RBP15.39■□□□□ 0.05
VRK3-225ENST00000601912 GAL3ST1Q99999 423 aa15.39■□□□□ 0.05
VRK3-225ENST00000601912 ADAT1Q9BUB4 502 aaKnown RBP15.39■□□□□ 0.05
VRK3-225ENST00000601912 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.38■□□□□ 0.05
VRK3-225ENST00000601912 CTDSPLO15194 276 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 SPRY1O43609 319 aaPredicted RBP15.38■□□□□ 0.05
VRK3-225ENST00000601912 CYB5AP00167 134 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 CSF3P09919 207 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 SERPINA2P20848 420 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 HAAOP46952 286 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 TAS2R20P59543 309 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 DEFA1P59665 94 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 DEFA3P59666 94 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 SCN1BQ07699 218 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 OR8G1Q15617 311 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 VHLLQ6RSH7 139 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 ASCL4Q6XD76 172 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 ZNF573Q86YE8 665 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 ZNF808Q8N4W9 903 aaPredicted RBP15.38■□□□□ 0.05
VRK3-225ENST00000601912 NKIRAS2Q9NYR9 191 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 DUSP13Q9UII6 198 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 ANGPTL7O43827 346 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 CHRM2P08172 466 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 PTH2RP49190 550 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 INPP1P49441 399 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 KLF3P57682 345 aaPredicted RBP15.38■□□□□ 0.05
VRK3-225ENST00000601912 MRPS10P82664 201 aaKnown RBP15.38■□□□□ 0.05
VRK3-225ENST00000601912 CDSNQ15517 529 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 RGS21Q2M5E4 152 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 ZNF611Q8N823 705 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 TMEM104Q8NE00 496 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 C19orf18Q8NEA5 215 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 OR13G1Q8NGZ3 307 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 OR51F2Q8NH61 342 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 TMEM171Q8WVE6 324 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 FGF23Q9GZV9 251 aaPredicted RBP15.38■□□□□ 0.05
VRK3-225ENST00000601912 BANF2Q9H503 90 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 CADP27708 2225 aa15.38■□□□□ 0.05
VRK3-225ENST00000601912 TRAV18A0A075B6X5 111 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 TUBAL3A6NHL2 446 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 IGHV3-13P01766 116 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 HLA-DQB1P01920 261 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 MGMTP16455 207 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 SLC25A26Q70HW3 274 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 BIVMQ86UB2 503 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 CALHM1Q8IU99 346 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 MKXQ8IYA7 352 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 SAXO1Q8IYX7 474 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 SPERTQ8NA61 448 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 ACBD4Q8NC06 268 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 OR10K1Q8NGX5 313 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 LINC01560Q8TB33 94 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 BBC3Q96PG8 261 aaPredicted RBP15.37■□□□□ 0.05
VRK3-225ENST00000601912 THAP7Q9BT49 309 aaPredicted RBP15.37■□□□□ 0.05
VRK3-225ENST00000601912 IL36GQ9NZH8 169 aa15.37■□□□□ 0.05
VRK3-225ENST00000601912 VSTM5A8MXK1 200 aa15.36■□□□□ 0.05
VRK3-225ENST00000601912 HTR3BO95264 441 aa15.36■□□□□ 0.05
VRK3-225ENST00000601912 CLDN14O95500 239 aa15.36■□□□□ 0.05
VRK3-225ENST00000601912 GTF2F2P13984 249 aa15.36■□□□□ 0.05
VRK3-225ENST00000601912 GRNP28799 593 aaKnown RBP15.36■□□□□ 0.05
VRK3-225ENST00000601912 RPS27AP62979 156 aaKnown RBP15.36■□□□□ 0.05
VRK3-225ENST00000601912 TMEM255AQ5JRV8 349 aa15.36■□□□□ 0.05
VRK3-225ENST00000601912 OR51T1Q8NGJ9 327 aa15.36■□□□□ 0.05
VRK3-225ENST00000601912 NUDT16L1Q9BRJ7 211 aaKnown RBP15.36■□□□□ 0.05
VRK3-225ENST00000601912 LPAR5Q9H1C0 372 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms