RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SLC5A7Q9GZV3 580 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 PCDHB16Q9NRJ7 776 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 GPR173Q9NS66 373 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 ZNF705EA8MWA4 302 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 TNFSF11O14788 317 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 EIF3IQ13347 325 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 OPN5Q6U736 354 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 ZIC4Q8N9L1 334 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 SEMA6DQ8NFY4 1073 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 ULBP2Q9BZM5 246 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 PLEKHJ1Q9NW61 149 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 ZNF581Q9P0T4 197 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 C14orf166Q9Y224 244 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 PTRH2Q9Y3E5 179 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 LOC102723996A0A087X1L8 192 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 FIGNL2A6NMB9 653 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 MSTNO14793 375 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 EIF1BO60739 113 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 SERPINA5P05154 406 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 ACKR3P25106 362 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 ZNF133P52736 654 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 MST1LQ2TV78 715 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 HLA-BQ31612 363 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 LDLRAD3Q86YD5 345 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 SVBPQ8N300 66 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 CLDN23Q96B33 292 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 SGK3Q96BR1 496 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 IMMP1LQ96LU5 166 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 ZNF2Q9BSG1 426 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 ANGPTL4Q9BY76 406 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 WDR54Q9H977 334 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 FOXD3Q9UJU5 478 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 PURGQ9UJV8 347 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 DKKL1Q9UK85 242 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 PCDHGA1Q9Y5H4 931 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 ANGPTL7O43827 346 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 F12P00748 615 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 TMEM225BP0DP42 221 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 COX6A1P12074 109 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 DSCR4P56555 118 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 CHAF1BQ13112 559 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 STK11Q15831 433 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 CCDC157Q569K6 752 aa17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 ZNF629Q9UEG4 869 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-225ENST00000600733 KIAA1549Q9HCM3 1950 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 A0A0J9YW62 118 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 F8W036 122 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 MTRF1O75570 445 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 IFNA2P01563 188 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 MTCP1P56278 107 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 BLOC1S1P78537 153 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 MAML2Q8IZL2 1156 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 MR1Q95460 341 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 SRXN1Q9BYN0 137 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 TLNRD1Q9H1K6 362 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 LPAR3Q9UBY5 353 aa17.66■□□□□ 0.42
SHKBP1-225ENST00000600733 SPRY1O43609 319 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 VAMP5O95183 116 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 PET100P0DJ07 73 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 FGF5P12034 268 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 RCC1P18754 421 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 RBM39Q14498 530 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 SURF2Q15527 256 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 RPL7L1Q6DKI1 246 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 SPTSSAQ969W0 71 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 Q96M66 194 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 HRH4Q9H3N8 390 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 MMP26Q9NRE1 261 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 KLF7O75840 302 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 ZNF205O95201 554 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 SCRN3Q0VDG4 424 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 IAH1Q2TAA2 248 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 RPUSD3Q6P087 351 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 Q6ZSR3 168 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 IFI44Q8TCB0 444 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 ADAMTS17Q8TE56 1095 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 NAA11Q9BSU3 229 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 FAAP24Q9BTP7 215 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 TREM1Q9NP99 234 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 HS3ST3B1Q9Y662 390 aa17.65■□□□□ 0.42
SHKBP1-225ENST00000600733 RBMXP38159 391 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 ZNF84P51523 738 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 SSR4P51571 173 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 RRADP55042 308 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 HGFACQ04756 655 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 TAF9Q16594 264 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 ZNF468Q5VIY5 522 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 OR2A2Q6IF42 318 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 CBLN2Q8IUK8 224 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 SULF2Q8IWU5 870 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 TMEM156Q8N614 296 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 LIME1Q9H400 295 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 DNAJB11Q9UBS4 358 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 NXT1Q9UKK6 140 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 FAM96BQ9Y3D0 163 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 FAM230AA0A1W2PPH8 454 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 LRP3O75074 770 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 HKR1P10072 659 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 ZNF708P17019 499 aa17.64■□□□□ 0.41
SHKBP1-225ENST00000600733 SPEM2Q0P670 501 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms