RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ISG15P05161 165 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 UBCP0CG48 685 aaKnown RBP13.09□□□□□ -0.31
RPS28-203ENST00000600659 ZNF19P17023 458 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 CAPGP40121 348 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 GNB2P62879 340 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 PAX8Q06710 450 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 TUSC1Q2TAM9 212 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 STUMQ69YW2 141 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 KCTD8Q6ZWB6 473 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 AQP3Q92482 292 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 MDFIQ99750 246 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 IGKV1-27A0A075B6S5 117 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 H0YAE9 185 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 AKR7A2O43488 359 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 ADAM20O43506 726 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 TFF1P04155 84 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 MUC1P15941 1255 aaPredicted RBP13.08□□□□□ -0.32
RPS28-203ENST00000600659 CCR9P51686 369 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 ACTA2P62736 377 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 ACTG2P63267 376 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 SRSF2Q01130 221 aaKnown RBP13.08□□□□□ -0.32
RPS28-203ENST00000600659 IL18R1Q13478 541 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 UBE2V2Q15819 145 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
RPS28-203ENST00000600659 NLRC3Q7RTR2 1065 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 OR51A4Q8NGJ6 313 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 RPS4Y2Q8TD47 263 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 C12orf43Q96C57 262 aaKnown RBP13.08□□□□□ -0.32
RPS28-203ENST00000600659 ADAT3Q96EY9 351 aaPredicted RBP13.08□□□□□ -0.32
RPS28-203ENST00000600659 CHST5Q9GZS9 411 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 RASSF4Q9H2L5 321 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 CLN8Q9UBY8 286 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 OR5V1Q9UGF6 321 aa13.08□□□□□ -0.32
RPS28-203ENST00000600659 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 ANKRD61A6NGH8 418 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 NDUFA2O43678 99 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 SYNGR1O43759 233 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 SELLP14151 372 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 MPZP25189 248 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 SRP14P37108 136 aaKnown RBP13.07□□□□□ -0.32
RPS28-203ENST00000600659 SLC34A1Q06495 639 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 ALKBH1Q13686 389 aaKnown RBP13.07□□□□□ -0.32
RPS28-203ENST00000600659 DOC2BQ14184 412 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 KCNJ8Q15842 424 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 MICBQ29980 383 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 ATPAF1Q5TC12 328 aaPredicted RBP13.07□□□□□ -0.32
RPS28-203ENST00000600659 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 HAGHLQ6PII5 290 aaPredicted RBP13.07□□□□□ -0.32
RPS28-203ENST00000600659 CALHM1Q8IU99 346 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 EGFL6Q8IUX8 553 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 FAM216BQ8N7L0 139 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 CCDC54Q8NEL0 328 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 ANGPTL6Q8NI99 470 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 RAB40AQ8WXH6 277 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 TFAP2CQ92754 450 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 HIST1H2AAQ96QV6 131 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 ZNF222Q9UK12 451 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 HSPE1-MOB4S4R3N1 261 aa13.07□□□□□ -0.32
RPS28-203ENST00000600659 DSCAML1Q8TD84 2053 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 KIR2DS1A0A191URI9 304 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 J3QT63 122 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 IFNA2P01563 188 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 HTR1AP08908 422 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 PGA5P0DJD9 388 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 TGM4P49221 684 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 NPY4RP50391 375 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 ETV1P50549 477 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 GMFBP60983 142 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 KLHL22Q53GT1 634 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 TMEM244Q5VVB8 128 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 CRIP3Q6Q6R5 217 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 ZNF788Q6ZQV5 615 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 POC1AQ8NBT0 407 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 ZNF485Q8NCK3 441 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 SETD9Q8NE22 299 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 C10orf35Q96D05 121 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 ZNF488Q96MN9 340 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 GAFA1Q96PS6 74 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 CCL13Q99616 98 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 ERVK-18Q9QC07 812 aa13.06□□□□□ -0.32
RPS28-203ENST00000600659 DIMT1Q9UNQ2 313 aaKnown RBP13.06□□□□□ -0.32
RPS28-203ENST00000600659 IGKV1D-17A0A075B6S4 117 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 DVL1O14640 695 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 TMPRSS2O15393 492 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 ZFPL1O95159 310 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 LALBAP00709 142 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 DCKP27707 260 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 HAAOP46952 286 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 GTF2A1P52655 376 aaPredicted RBP13.05□□□□□ -0.32
RPS28-203ENST00000600659 AQP4P55087 323 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 OR2G6Q5TZ20 316 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 OR5T2Q8NGG2 359 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 TRMT10AQ8TBZ6 339 aaKnown RBP13.05□□□□□ -0.32
RPS28-203ENST00000600659 NPRL2Q8WTW4 380 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 RGP1Q92546 391 aaPredicted RBP13.05□□□□□ -0.32
RPS28-203ENST00000600659 GGHQ92820 318 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 TECTBQ96PL2 329 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms