RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ERVK-18Q9QC07 812 aa7.29□□□□□ -1.24
SSBP4-208ENST00000600628 NKX1-2Q9UD57 310 aaPredicted RBP7.29□□□□□ -1.24
SSBP4-208ENST00000600628 ENPP5Q9UJA9 477 aa7.29□□□□□ -1.24
SSBP4-208ENST00000600628 HSPE1-MOB4S4R3N1 261 aa7.29□□□□□ -1.24
SSBP4-208ENST00000600628 IGKV1D-17A0A075B6S4 117 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 IGKV1-27A0A075B6S5 117 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 A0A0A6YYJ9 748 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 IGKV1-9A0A0C4DH69 117 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 DAPL1A0PJW8 107 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 SNTNA6NMZ2 147 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 ZNF732B4DXR9 585 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 C3orf80F5H4A9 247 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 H0YJX3 145 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 RHBDL1O75783 438 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 RPP14O95059 124 aaKnown RBP7.28□□□□□ -1.24
SSBP4-208ENST00000600628 ALX3O95076 343 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 BAG2O95816 211 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 CLIC3O95833 236 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 PLATP00750 562 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 GNAO1P09471 354 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 UBCP0CG48 685 aaKnown RBP7.28□□□□□ -1.24
SSBP4-208ENST00000600628 GPM6AP51674 278 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 SCGB2A2Q13296 93 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 UBE2V2Q15819 145 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 MICBQ29980 383 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 TP53I3Q53FA7 332 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 TTC23Q5W5X9 447 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 ZNF529Q6P280 563 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 UTS2BQ765I0 119 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 NLRC3Q7RTR2 1065 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 OR8B3Q8NGG8 313 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 NANPQ8TBE9 248 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 TFAP2CQ92754 450 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 RPL3LQ92901 407 aaKnown RBP7.28□□□□□ -1.24
SSBP4-208ENST00000600628 OR8B2Q96RD0 313 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 OCEL1Q9H607 264 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 SEBOXQ9HB31 216 aaPredicted RBP7.28□□□□□ -1.24
SSBP4-208ENST00000600628 AMBNQ9NP70 447 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 PLCXD1Q9NUJ7 323 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 CLN8Q9UBY8 286 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 RPL36Q9Y3U8 105 aaKnown RBP7.28□□□□□ -1.24
SSBP4-208ENST00000600628 PKD1L1Q8TDX9 2849 aa7.28□□□□□ -1.24
SSBP4-208ENST00000600628 CMYA5Q8N3K9 4069 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 A0A1B0GW55 424 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 LOC107986453A0A1B0GWG9 222 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 A6NLC8 198 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 E9PI62 339 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 J3QT63 122 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 GPR37O15354 613 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 SYT7O43581 403 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 FADS2O95864 444 aaKnown RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ECDO95905 644 aaPredicted RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 GYPAP02724 150 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 MT-ND2P03891 347 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4L2P0CJ85 424 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4L3P0CJ86 424 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4L4P0CJ87 422 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4L5P0CJ88 424 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4L6P0CJ89 424 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4L7P0CJ90 424 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 PSG2P11465 335 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 PIPP12273 146 aaPredicted RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 EPHA1P21709 976 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DCKP27707 260 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 CAV3P56539 151 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 HILS1P60008 231 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ACTA2P62736 377 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 GNB2P62879 340 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ACTG2P63267 376 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ALKBH1Q13686 389 aaKnown RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 LRRC36Q1X8D7 754 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 KLHL22Q53GT1 634 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DMRTC1Q5HYR2 192 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 CEP78Q5JTW2 689 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 TMEM244Q5VVB8 128 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4L9Q6RFH8 374 aaPredicted RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 LHFPL3Q86UP9 236 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 CALHM1Q8IU99 346 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 RDH10Q8IZV5 341 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DHRSXQ8N5I4 330 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 POC1AQ8NBT0 407 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DNAAF1Q8NEP3 725 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 OR10AC1Q8NH08 325 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ZFAND2BQ8WV99 257 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 NRG4Q8WWG1 115 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 PP6455Q8WZ26 134 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ADAT3Q96EY9 351 aaPredicted RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 SDSLQ96GA7 329 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 GAFA1Q96PS6 74 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 NRIP2Q9BQI9 281 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ADI1Q9BV57 179 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ALG8Q9BVK2 526 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 C19orf24Q9BVV8 132 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 PKIBQ9C010 78 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 SIRPDQ9H106 197 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 ISG20L2Q9H9L3 353 aaKnown RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 UNKLQ9H9P5 680 aaKnown RBP7.27□□□□□ -1.25
SSBP4-208ENST00000600628 FKBP14Q9NWM8 211 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 RASL12Q9NYN1 266 aa7.27□□□□□ -1.25
SSBP4-208ENST00000600628 DUX4Q9UBX2 424 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms