RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 BATF2Q8N1L9 274 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ZBTB8BQ8NAP8 495 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-218ENST00000600383 OR56B1Q8NGI3 324 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ARHGAP5-AS1Q96IT6 56 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 BEX2Q9BXY8 128 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 METTL9Q9H1A3 318 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 BEX1Q9HBH7 125 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 COPZ2Q9P299 210 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 NUBP2Q9Y5Y2 271 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 NAP1L6A6NFF2 107 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 LILRA1O75019 489 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 CCNKO75909 580 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 GLI4P10075 376 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 HOXB1P14653 301 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-218ENST00000600383 BMP5P22003 454 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 GABRR1P24046 479 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 BLVRBP30043 206 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-218ENST00000600383 RCVRNP35243 200 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ID4P47928 161 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 GPM6AP51674 278 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ERVS71-1P61550 626 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ZBTB37Q5TC79 503 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ZNF474Q6S9Z5 364 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ZNF782Q6ZMW2 699 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-218ENST00000600383 TRAPPC6BQ86SZ2 158 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 GVQW1Q8N7I0 195 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 C1orf162Q8NEQ5 155 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-218ENST00000600383 CSNK2A3Q8NEV1 391 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 OR4S1Q8NGB4 309 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 OR4C16Q8NGL9 310 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 OR51F2Q8NH61 342 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 OR2J1Q9GZK6 312 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 OR10A4Q9H209 315 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 SCPEP1Q9HB40 452 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 FLVCR2Q9UPI3 526 aa13.06□□□□□ -0.32
HIF3A-218ENST00000600383 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 A8MV72 311 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-218ENST00000600383 CYB5AP00167 134 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 DHFRP00374 187 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 PSMB1P20618 241 aaKnown RBP13.05□□□□□ -0.32
HIF3A-218ENST00000600383 FAUP35544 74 aaKnown RBP13.05□□□□□ -0.32
HIF3A-218ENST00000600383 PPP1CBP62140 327 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 PDZK1IP1Q13113 114 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 FAM189A2Q15884 450 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 CALHM1Q8IU99 346 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 STEAP2Q8NFT2 490 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 DACT3Q96B18 629 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-218ENST00000600383 TECTBQ96PL2 329 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 HIST1H2AAQ96QV6 131 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 TP63Q9H3D4 680 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-218ENST00000600383 KCNK7Q9Y2U2 307 aa13.05□□□□□ -0.32
HIF3A-218ENST00000600383 SPTA1P02549 2419 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 ANKRD30BLA7E2S9 258 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 SMPD2O60906 423 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 H2AFB2P0C5Z0 115 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 AKAIN1P0CW23 69 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 UCP2P55851 309 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 GNG2P59768 71 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 EIF2S3LQ2VIR3 472 aaKnown RBP13.04□□□□□ -0.32
HIF3A-218ENST00000600383 STEAP1BQ6NZ63 245 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 CDH24Q86UP0 819 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 ZDHHC23Q8IYP9 409 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 OR56B4Q8NH76 319 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 SLX1AQ9BQ83 275 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 OPA3Q9H6K4 179 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 IGKV1-12A0A0C4DH73 117 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 EEF1E1-BLOC1S5C9J1V9 151 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 M0QYG6 137 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 IGKV1D-12P01611 117 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 IGKV3-15P01624 115 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 CSN2P05814 226 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 HOXD4P09016 255 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-218ENST00000600383 HIST1H1DP16402 221 aaKnown RBP13.04□□□□□ -0.32
HIF3A-218ENST00000600383 CA6P23280 308 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 CEACAM8P31997 349 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-218ENST00000600383 HAAOP46952 286 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 CBX3Q13185 183 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 TAF9Q16594 264 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 NCCRP1Q6ZVX7 275 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-218ENST00000600383 SLC25A26Q70HW3 274 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 ZNF611Q8N823 705 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 OR1J1Q8NGS3 322 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 C20orf85Q9H1P6 137 aa13.04□□□□□ -0.32
HIF3A-218ENST00000600383 A0A0A6YYJ9 748 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 OR5H1A6NKK0 313 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 ZNF736B4DX44 427 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-218ENST00000600383 ZNF732B4DXR9 585 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 RAB3DO95716 219 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 CST4P01036 141 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 SFTPBP07988 381 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 MELTFP08582 738 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 TAS2R19P59542 299 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 BTG1P62324 171 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 SSBP1Q04837 148 aaKnown RBP13.03□□□□□ -0.32
HIF3A-218ENST00000600383 ARFRP1Q13795 201 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 CEACAM21Q3KPI0 293 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 NKAPLQ5M9Q1 402 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 OR52W1Q6IF63 320 aa13.03□□□□□ -0.32
HIF3A-218ENST00000600383 FAM89BQ8N5H3 189 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms