RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 FAM221AA4D161 298 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 PRR32B1ATL7 298 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 CTSAP10619 480 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 B4GALNT1Q00973 533 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 CNN3Q15417 329 aaKnown RBP8.72□□□□□ -1.01
NFKB1-212ENST00000600343 SAMD13Q5VXD3 122 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 LINC01555Q8NAE3 123 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 OR4B1Q8NGF8 309 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 OR2G3Q8NGZ4 309 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 GRHL3Q8TE85 626 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 LPAR4Q99677 370 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 PNO1Q9NRX1 252 aaKnown RBP8.72□□□□□ -1.01
NFKB1-212ENST00000600343 PTPRDP23468 1912 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 GREB1Q4ZG55 1949 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 A0A1B0GV72 72 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 ARL5CA6NH57 179 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 DDAH2O95865 285 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 PFN1P07737 140 aaKnown RBP8.72□□□□□ -1.01
NFKB1-212ENST00000600343 LAMP2P13473 410 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 KRTCAP3Q53RY4 240 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 OR8G5Q8NG78 346 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 CPT1CQ8TCG5 803 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 PYGO2Q9BRQ0 406 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 PLK3Q9H4B4 646 aa8.72□□□□□ -1.01
NFKB1-212ENST00000600343 FAM230AA0A1W2PPH8 454 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 C4orf47A7E2U8 309 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 M0QZQ0 153 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 HMGN2P05204 90 aaKnown RBP8.71□□□□□ -1.01
NFKB1-212ENST00000600343 JMJD7P0C870 316 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 SLC6A6P31641 620 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 NUMA1Q14980 2115 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 PLEKHS1Q5SXH7 462 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 C16orf82Q7Z2V1 217 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 ERASQ7Z444 233 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 ZNF48Q96MX3 618 aaPredicted RBP8.71□□□□□ -1.01
NFKB1-212ENST00000600343 CMKLR1Q99788 373 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 KLHDC3Q9BQ90 382 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 EFCAB11Q9BUY7 163 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 CKLFQ9UBR5 152 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 A0A1B0GUS0 222 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 HIST1H1CP16403 213 aaKnown RBP8.71□□□□□ -1.01
NFKB1-212ENST00000600343 CCKBRP32239 447 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 CDKN1AP38936 164 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 GALR1P47211 349 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 RAB38P57729 211 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 SUPT4H1P63272 117 aaKnown RBP8.71□□□□□ -1.01
NFKB1-212ENST00000600343 PRDX4Q13162 271 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 Q6ZWC4 215 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 SAXO1Q8IYX7 474 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 TMEM123Q8N131 208 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 CMTM2Q8TAZ6 248 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 ADAMTS15Q8TE58 950 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 CXorf40AQ8TE69 158 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 FGGYQ96C11 551 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 IMMP2LQ96T52 175 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 PRSS27Q9BQR3 290 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 GPR132Q9UNW8 380 aa8.71□□□□□ -1.01
NFKB1-212ENST00000600343 A0A0A6YYH2 397 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 A6NJ64 397 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 CORTO00230 105 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 CTSDP07339 412 aaPredicted RBP8.71□□□□□ -1.02
NFKB1-212ENST00000600343 MC5RP33032 325 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 SUMO1P63165 101 aaKnown RBP8.71□□□□□ -1.02
NFKB1-212ENST00000600343 SPATA45Q537H7 98 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 GLYATL3Q5SZD4 288 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 SLC16A9Q7RTY1 509 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 ADGRE4PQ86SQ3 457 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 FNDC9Q8TBE3 224 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 ZNRF4Q8WWF5 429 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 RNF166Q96A37 237 aaPredicted RBP8.71□□□□□ -1.02
NFKB1-212ENST00000600343 MACROD1Q9BQ69 325 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 SDF2L1Q9HCN8 221 aa8.71□□□□□ -1.02
NFKB1-212ENST00000600343 A0A1W2PRS3 328 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 NUPR1O60356 82 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 FAHP16930 419 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 BLKP51451 505 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 FAM90A2PQ658T7 463 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 OR4A47Q6IF82 309 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 NIT1Q86X76 327 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 CLDND2Q8NHS1 167 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 MRPS28Q9Y2Q9 187 aaKnown RBP8.7□□□□□ -1.02
NFKB1-212ENST00000600343 OR5B21A6NL26 309 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 E5RGE8 158 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 H3BNC9 293 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 CFPP27918 469 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 EPHA8P29322 1005 aaPredicted RBP8.7□□□□□ -1.02
NFKB1-212ENST00000600343 PRLHRP49683 370 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 NCBP2P52298 156 aaKnown RBP eCLIP8.7□□□□□ -1.02
NFKB1-212ENST00000600343 CRYBB1P53674 252 aaPredicted RBP8.7□□□□□ -1.02
NFKB1-212ENST00000600343 TPPP2P59282 170 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 UBE2NP61088 152 aaKnown RBP8.7□□□□□ -1.02
NFKB1-212ENST00000600343 RBPJQ06330 500 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 ZFP36L1Q07352 338 aaKnown RBP8.7□□□□□ -1.02
NFKB1-212ENST00000600343 C9orf50Q5SZB4 431 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 SYT13Q7L8C5 426 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 D2HGDHQ8N465 521 aa8.7□□□□□ -1.02
NFKB1-212ENST00000600343 CSNK1A1LQ8N752 337 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms