RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 APOC1P02654 83 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 HSD17B1P14061 328 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 FAHP16930 419 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 GSTT1P30711 240 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 PRDX2P32119 198 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 GNALP38405 381 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 IFNGR2P38484 337 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 GPM6AP51674 278 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 RPL31P62899 125 aaKnown RBP4.9□□□□□ -1.63
VRK3-220ENST00000600259 GNG3P63215 75 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 EIF2B1Q14232 305 aaKnown RBP4.9□□□□□ -1.63
VRK3-220ENST00000600259 SNCBQ16143 134 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 TMEM95Q3KNT9 176 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 CEACAM21Q3KPI0 293 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 DMRTC1Q5HYR2 192 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 ZNF626Q68DY1 528 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 RPL13AP3Q6NVV1 102 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 ACP7Q6ZNF0 438 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 TMEM219Q86XT9 240 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 CALHM1Q8IU99 346 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 TMEM185AQ8NFB2 350 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 OR5AU1Q8NGC0 362 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 OR11H6Q8NGC7 330 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 OR8B12Q8NGG6 310 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 OR5A2Q8NGI9 324 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 OR2T27Q8NH04 317 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 MALSU1Q96EH3 234 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 PGAM5Q96HS1 289 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 ZNF488Q96MN9 340 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 WWC2-AS2Q96NR7 200 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 OR5M11Q96RB7 305 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 OR8B4Q96RC9 309 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 MYLK2Q9H1R3 596 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 MUC13Q9H3R2 512 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 CCDC134Q9H6E4 229 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 MED20Q9H944 212 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 ABCB9Q9NP78 766 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 BRD7Q9NPI1 651 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 CMC2Q9NRP2 79 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 RASL12Q9NYN1 266 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 V9GYQ6 96 aa4.9□□□□□ -1.63
VRK3-220ENST00000600259 FAM183AA6NL82 134 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 SYNGR1O43759 233 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 KRT36O76013 467 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 GLCEO94923 617 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 FABP3P05413 133 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 H2BFMP0C1H6 154 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 PGA5P0DJD9 388 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 H2AFXP16104 143 aaPredicted RBP4.89□□□□□ -1.63
VRK3-220ENST00000600259 CD33P20138 364 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 COX7A1P24310 79 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 HSD11B1P28845 292 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 MAGEA2P43356 314 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 CEBPDP49716 269 aaPredicted RBP4.89□□□□□ -1.63
VRK3-220ENST00000600259 NUDT2P50583 147 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 BLVRAP53004 296 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 LGALS4P56470 323 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 ERVK11-1P61568 191 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 PPP1R8Q12972 351 aaKnown RBP4.89□□□□□ -1.63
VRK3-220ENST00000600259 SSX2Q16385 188 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 GFOD2Q3B7J2 385 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 PLA1AQ53H76 456 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 DEFB121Q5J5C9 76 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 C10orf99Q6UWK7 81 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 CD300LDQ6UXZ3 194 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 ZNF782Q6ZMW2 699 aaPredicted RBP4.89□□□□□ -1.63
VRK3-220ENST00000600259 KCTD8Q6ZWB6 473 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 SHFQ7M4L6 423 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 TCF23Q7RTU1 214 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 TRPM8Q7Z2W7 1104 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 HDXQ7Z353 690 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 THAP5Q7Z6K1 395 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 ERI1Q8IV48 349 aaKnown RBP4.89□□□□□ -1.63
VRK3-220ENST00000600259 ZDHHC23Q8IYP9 409 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 POC1AQ8NBT0 407 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 OR4M1Q8NGD0 313 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 OR52L1Q8NGH7 329 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 OR6K6Q8NGW6 343 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 OR6N2Q8NGY6 317 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 OTOSQ8NHW6 89 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 ZNF671Q8TAW3 534 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 RPS4Y2Q8TD47 263 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 ITFG2Q969R8 447 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 INTS14Q96SY0 518 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 B9D2Q9BPU9 175 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 DGCR6LQ9BY27 220 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 HES4Q9HCC6 221 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 ARMC1Q9NVT9 282 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 VNN3Q9NY84 501 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 USE1Q9NZ43 259 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 BAIAP2Q9UQB8 552 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 KLHDC2Q9Y2U9 406 aa4.89□□□□□ -1.63
VRK3-220ENST00000600259 TBL2Q9Y4P3 447 aaKnown RBP4.89□□□□□ -1.63
VRK3-220ENST00000600259 A0A0U1RQV5 110 aa4.88□□□□□ -1.63
VRK3-220ENST00000600259 A0A1W2PRX2 142 aa4.88□□□□□ -1.63
VRK3-220ENST00000600259 PRR32B1ATL7 298 aa4.88□□□□□ -1.63
VRK3-220ENST00000600259 K7N7A8 449 aa4.88□□□□□ -1.63
VRK3-220ENST00000600259 TNFRSF11BO00300 401 aa4.88□□□□□ -1.63
VRK3-220ENST00000600259 DYNC1I1O14576 645 aa4.88□□□□□ -1.63
VRK3-220ENST00000600259 ARPC2O15144 300 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms