RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 LURAP1LQ8IV03 231 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 SPARTQ8N0X7 666 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 OR13C3Q8NGS6 347 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 GPR148Q8TDV2 347 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 ORAI1Q96D31 301 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 SEH1LQ96EE3 360 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 HIST1H2AAQ96QV6 131 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 NARFLQ9H6Q4 476 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 ISYNA1Q9NPH2 558 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 ACOT13Q9NPJ3 140 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 BLOC1S6Q9UL45 172 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 NIPBLQ6KC79 2804 aaeCLIP11.51□□□□□ -0.57
VRK3-219ENST00000600137 PPIAL4EA0A075B759 164 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 TRBV5-7A0A0A0MS05 114 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 PNMA8CA0A1B0GUJ8 204 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 A6NLC8 198 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 SRRM5B3KS81 715 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 FAM157AC9JC47 383 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 F5H0A9 414 aaPredicted RBP11.5□□□□□ -0.57
VRK3-219ENST00000600137 PPIAL4DF5H284 164 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 PIN1P1O15428 100 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 SYNGR1O43759 233 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
VRK3-219ENST00000600137 FCN3O75636 299 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 SC5DO75845 299 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 IGHV2-5P01817 119 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 PPIAL4FP0DN26 164 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 AMY2BP19961 511 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 SOX2P48431 317 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 FUT6P51993 359 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 CHN2P52757 468 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 GP2P55259 537 aaKnown RBP11.5□□□□□ -0.57
VRK3-219ENST00000600137 GPR50Q13585 617 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 MED22Q15528 200 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 TBCEQ15813 527 aaPredicted RBP11.5□□□□□ -0.57
VRK3-219ENST00000600137 ZNF404Q494X3 552 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 TEX36Q5VZQ5 186 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 ANGPTL5Q86XS5 388 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 OR11L1Q8NGX0 322 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 OR10Z1Q8NGY1 313 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 NPRL2Q8WTW4 380 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 LRRC29Q8WV35 223 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 HPS1Q92902 700 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 MSI2Q96DH6 328 aaKnown RBP11.5□□□□□ -0.57
VRK3-219ENST00000600137 TIMD4Q96H15 378 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 OPALINQ96PE5 141 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 TMEM246Q9BRR3 403 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 CCDC90BQ9GZT6 254 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 WDR13Q9H1Z4 485 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 ZCCHC4Q9H5U6 513 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 PLEKHA1Q9HB21 404 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 SF3B6Q9Y3B4 125 aaKnown RBP11.5□□□□□ -0.57
VRK3-219ENST00000600137 PPIAL4AQ9Y536 164 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 DOCK11Q5JSL3 2073 aa11.5□□□□□ -0.57
VRK3-219ENST00000600137 SONP18583 2426 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 LRRC30A6NM36 301 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 LGALS8O00214 317 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 AKR7A2O43488 359 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 NOS1APO75052 506 aaPredicted RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 GPX5O75715 221 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 GATBO75879 557 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 SERPINA3P01011 423 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 ACAA1P09110 424 aaPredicted RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 WNT2P09544 360 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 AZGP1P25311 298 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 CD80P33681 288 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 MDH2P40926 338 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 ERVK11-1P61568 191 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 INSL4Q14641 139 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 YIF1BQ5BJH7 314 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 HAGHLQ6PII5 290 aaPredicted RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 KCTD8Q6ZWB6 473 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 PEG10Q86TG7 708 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 BIVMQ86UB2 503 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 FAM90A1Q86YD7 464 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 SERPINA12Q8IW75 414 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 C1orf87Q8N0U7 546 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 OR51A2Q8NGJ7 313 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 OR13C9Q8NGT0 318 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 TRMT10AQ8TBZ6 339 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 TECTBQ96PL2 329 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 MGLLQ99685 303 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 PATZ1Q9HBE1 687 aaKnown RBP11.49□□□□□ -0.57
VRK3-219ENST00000600137 DHDHQ9UQ10 334 aa11.49□□□□□ -0.57
VRK3-219ENST00000600137 FAM230AA0A1W2PPH8 454 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 CEACAM18A8MTB9 384 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 F8VVB4 439 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 F8VWA3 439 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 ZNF20P17024 532 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 HAAOP46952 286 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 MLLT11Q13015 90 aaPredicted RBP11.48□□□□□ -0.57
VRK3-219ENST00000600137 Q499Y3 187 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 KCTD21Q4G0X4 260 aa11.48□□□□□ -0.57
VRK3-219ENST00000600137 SFRP4Q6FHJ7 346 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms