RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 GSTP1P09211 210 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 FAM87AP0C7U9 286 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 PRKACBP22694 351 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 GK2Q14410 553 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 HLXQ14774 488 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF169Q14929 603 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 NKPD1Q17RQ9 610 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 SEZ6L2Q6UXD5 910 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 IDO2Q6ZQW0 420 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 BPIFB2Q8N4F0 458 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 S100A13Q99584 98 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 PLSCR2Q9NRY7 297 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF816-ZNF321PA0A0X1KG74 233 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 IL5P05113 134 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 RBP2P50120 134 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 GNG2P59768 71 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 GUSBP1Q15486 140 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 NDUFA5Q16718 116 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 TFAP2EQ6VUC0 442 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 MOB3CQ70IA8 216 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 CD163Q86VB7 1156 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 BORCS8Q96FH0 119 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 MED30Q96HR3 178 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 REPIN1Q9BWE0 567 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 TM2D1Q9BX74 207 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 POFUT1Q9H488 388 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF69Q9UC07 566 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 STARD10Q9Y365 291 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 CACNA1GO43497 2377 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 BOD1L1Q8NFC6 3051 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 OR14I1A6ND48 311 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 Q5BKY6 102 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF626Q68DY1 528 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 IGFL3Q6UXB1 125 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 OR56B2PQ8NGI1 322 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 SNAPC3Q92966 411 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 IFT46Q9NQC8 304 aa14.72□□□□□ -0.05
SHKBP1-216ENST00000598201 MEIKINA0A087WXM9 373 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 K7EM74 188 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 ANXA3P12429 323 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 ERP29P30040 261 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 BLVRBP30043 206 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 PLP2Q04941 152 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 SF3B4Q15427 424 aaKnown RBP eCLIP14.71□□□□□ -0.051e-6■■■■■ 60
SHKBP1-216ENST00000598201 PLCXD3Q63HM9 321 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 LHFPL2Q6ZUX7 228 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 FAM214BQ7L5A3 538 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 MDP1Q86V88 176 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 C9orf106Q8NAJ2 232 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 NAXEQ8NCW5 288 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 STEAP2Q8NFT2 490 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 OR13C8Q8NGS7 320 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 APOBEC3DQ96AK3 386 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF75AQ96N20 296 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 GLRX2Q9NS18 164 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 ITPR1Q14643 2758 aa14.71□□□□□ -0.05
SHKBP1-216ENST00000598201 EPG5Q9HCE0 2579 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 IGKV1-12A0A0C4DH73 117 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF850A8MQ14 1090 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 IGKV1D-12P01611 117 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 IGHV1-2P23083 117 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 HRH1P35367 487 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 WNT5AP41221 380 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 FAM189A2Q15884 450 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 SCGB2B2Q4G0G5 96 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 SMUG1Q53HV7 270 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 RNASE10Q5GAN6 216 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 SARAFQ96BY9 339 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 PECRQ9BY49 303 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 METTL9Q9H1A3 318 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 PTTG3PQ9NZH4 202 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF581Q9P0T4 197 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 KCNN3Q9UGI6 736 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 GPR160Q9UJ42 338 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 TUBD1Q9UJT1 453 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 ANAPC10Q9UM13 185 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 CREBL2O60519 120 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 HTR3BO95264 441 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 MEF2DQ14814 521 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 CDK10Q15131 360 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 PNLIPRP3Q17RR3 467 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 ASCL4Q6XD76 172 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 MRGPRFQ96AM1 343 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 Q96M66 194 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 CA10Q9NS85 328 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 TP53TG5Q9Y2B4 290 aa14.7□□□□□ -0.06
SHKBP1-216ENST00000598201 A0A1W2PR80 420 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 SNRPGP15A8MWD9 76 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 CPT2P23786 658 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 KIR2DL2P43627 348 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 FUT6P51993 359 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 RSU1Q15404 277 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ZBTB37Q5TC79 503 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 MYPOPQ86VE0 399 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ST8SIA4Q92187 359 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 FBXW5Q969U6 566 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 TRAF4Q9BUZ4 470 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 FGF23Q9GZV9 251 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 GPN1Q9HCN4 374 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms