RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 C11orf44Q8N8P7 122 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 PAPD5Q8NDF8 572 aaKnown RBP9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 TMEM185AQ8NFB2 350 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 PPP1R35Q8TAP8 253 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 GIPC3Q8TF64 312 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 NPRL2Q8WTW4 380 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 AJUBAQ96IF1 538 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 DNTTIP1Q9H147 329 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 RGCCQ9H4X1 137 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 ZNF222Q9UK12 451 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 FOXJ3Q9UPW0 622 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 MAB21L2Q9Y586 359 aa9.87□□□□□ -0.83
SOX2-OT-228ENST00000597828 ZNF732B4DXR9 585 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 PRR23D1E9PI22 279 aaPredicted RBP9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 H0YHG0 523 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 M0R1W7 72 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 GPR37O15354 613 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 RRP9O43818 475 aaKnown RBP9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 ANGPTL7O43827 346 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 ACAA1P09110 424 aaPredicted RBP9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 PRR23D2P0DMB1 279 aaPredicted RBP9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 PSG2P11465 335 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 PAICSP22234 425 aaKnown RBP9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 SLC2A5P22732 501 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 FASP25445 335 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 TGFBR2P37173 567 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 UBE2E1P51965 193 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 CAV3P56539 151 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 ACTR3P61158 418 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 GK3PQ14409 553 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 GINS1Q14691 196 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 KPNB1Q14974 876 aaKnown RBP9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 C2orf68Q2NKX9 166 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 FAM76BQ5HYJ3 339 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 TMEM236Q5W0B7 351 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 CD300LDQ6UXZ3 194 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 C1orf122Q6ZSJ8 110 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 CPOQ8IVL8 374 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 BATF2Q8N1L9 274 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 FTMTQ8N4E7 242 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 ZNF488Q96MN9 340 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 SSX3Q99909 188 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 NIPAL2Q9H841 368 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 C19orf12Q9NSK7 152 aa9.86□□□□□ -0.83
SOX2-OT-228ENST00000597828 G3V4G9 280 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 CHST1O43916 411 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 MRPL3P09001 348 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 CSF1P09603 554 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 BMXP51813 675 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 ERVFRD-1P60508 538 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 RPS7P62081 194 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 NCR3LG1Q68D85 454 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 KRT77Q7Z794 578 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 MKXQ8IYA7 352 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 BEND2Q8NDZ0 799 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 OR5R1Q8NH85 324 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 FAM81AQ8TBF8 368 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 UTP4Q969X6 686 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 PPP1R14AQ96A00 147 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 MED30Q96HR3 178 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 DMRTB1Q96MA1 342 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 OR51I2Q9H344 312 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 METTL8Q9H825 291 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 ZNF556Q9HAH1 456 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 FAM206AQ9NX38 181 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 DNAJB9Q9UBS3 223 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 COPS3Q9UNS2 423 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 DNAH3Q8TD57 4116 aa9.85□□□□□ -0.83
SOX2-OT-228ENST00000597828 ARRDC5A6NEK1 342 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 H0YAE9 185 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 PRODHO43272 600 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 SYNGR1O43759 233 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 CCL3L1P16619 93 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 FAHP16930 419 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 ALOX5APP20292 161 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 PRKACGP22612 351 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 GABRA5P31644 462 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 EFNB2P52799 333 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 CAPZA1P52907 286 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 GNG3P63215 75 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 MFGE8Q08431 387 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 ACSM1Q08AH1 577 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 APOFQ13790 326 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 SNCBQ16143 134 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 HAGHLQ6PII5 290 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 CRIP3Q6Q6R5 217 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 MOB3CQ70IA8 216 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 COMMD2Q86X83 199 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 LYG1Q8N1E2 194 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 CD177Q8N6Q3 437 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 ZNF454Q8N9F8 522 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 OR51G2Q8NGK0 314 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 AQP3Q92482 292 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 ABCB9Q9NP78 766 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 GPR84Q9NQS5 396 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 FBLN5Q9UBX5 448 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 LAMP5Q9UJQ1 280 aa9.84□□□□□ -0.83
SOX2-OT-228ENST00000597828 MEX3AA1L020 520 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-228ENST00000597828 CCDC182A6NF36 153 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms