RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 MAP2K3P46734 347 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 CAPZA1P52907 286 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 APOFQ13790 326 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 BLMHQ13867 455 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 TRPM8Q7Z2W7 1104 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 KRT77Q7Z794 578 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 COMMD2Q86X83 199 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 MKXQ8IYA7 352 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 C11orf44Q8N8P7 122 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 BEND2Q8NDZ0 799 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 LRGUKQ96M69 825 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 SSX3Q99909 188 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 TTTY10Q9BZA0 68 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 NIPAL2Q9H841 368 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 FAM206AQ9NX38 181 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 LAMP5Q9UJQ1 280 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 FOXJ3Q9UPW0 622 aa8.58□□□□□ -1.04
LSM4-205ENST00000597776 TRBV23-1A0A0A0MS06 115 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 A0A0U1RQV5 110 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 GNGT2O14610 69 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 OSMP13725 252 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 PRKACGP22612 351 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 CEBPDP49716 269 aaPredicted RBP8.57□□□□□ -1.04
LSM4-205ENST00000597776 EFNB2P52799 333 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 CDK5Q00535 292 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 MFGE8Q08431 387 aaPredicted RBP8.57□□□□□ -1.04
LSM4-205ENST00000597776 GK3PQ14409 553 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 CEACAM21Q3KPI0 293 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 PLCXD3Q63HM9 321 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 HAGHLQ6PII5 290 aaPredicted RBP8.57□□□□□ -1.04
LSM4-205ENST00000597776 MOB3CQ70IA8 216 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 BATF2Q8N1L9 274 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 CD177Q8N6Q3 437 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 PAPD5Q8NDF8 572 aaKnown RBP8.57□□□□□ -1.04
LSM4-205ENST00000597776 OR51G2Q8NGK0 314 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 OR5D13Q8NGL4 314 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 OR51E1Q8TCB6 317 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 CANT1Q8WVQ1 401 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 AQP3Q92482 292 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 PPP1R14AQ96A00 147 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 ASB9Q96DX5 294 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 SDSLQ96GA7 329 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 GPR84Q9NQS5 396 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 FBLN5Q9UBX5 448 aa8.57□□□□□ -1.04
LSM4-205ENST00000597776 SF3B6Q9Y3B4 125 aaKnown RBP8.57□□□□□ -1.04
LSM4-205ENST00000597776 TET2Q6N021 2002 aaPredicted RBP8.56□□□□□ -1.04
LSM4-205ENST00000597776 TMEM269A0A1B0GVZ9 245 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 CCDC182A6NF36 153 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 OR5B21A6NL26 309 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 RFPL4AA6NLU0 287 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 RFPL4AL1F8VTS6 287 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 G3V4G9 280 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 SYNGR1O43759 233 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 CHST1O43916 411 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 E2F6O75461 281 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 MTRF1O75570 445 aaKnown RBP8.56□□□□□ -1.04
LSM4-205ENST00000597776 HMGN1P05114 100 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 T-ENOLP0DO92 83 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 COX7A1P24310 79 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 BMXP51813 675 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 ERVFRD-1P60508 538 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 HERPUD1Q15011 391 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 LRRC75BQ2VPJ9 315 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 SLC35D3Q5M8T2 416 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 TMEM200BQ69YZ2 307 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 CRIP3Q6Q6R5 217 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 ACP7Q6ZNF0 438 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 Q6ZTK2 550 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 KRT74Q7RTS7 529 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 THAP5Q7Z6K1 395 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 KLHDC1Q8N7A1 406 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 POC1AQ8NBT0 407 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 OR4M1Q8NGD0 313 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 OR5A2Q8NGI9 324 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 OR4C13Q8NGP0 309 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 ZNF671Q8TAW3 534 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 TEAD3Q99594 435 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 YIPF3Q9GZM5 350 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 PBOV1Q9GZY1 135 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 ZNF556Q9HAH1 456 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 COPS3Q9UNS2 423 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 PIGLQ9Y2B2 252 aa8.56□□□□□ -1.04
LSM4-205ENST00000597776 MEGF11A6BM72 1044 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 ACOD1A6NK06 481 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 M0R129 80 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 GSC2O15499 205 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 IGLV3-1P01715 115 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
LSM4-205ENST00000597776 CCL3L1P16619 93 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 CALB2P22676 271 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 PRDX2P32119 198 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 KIR2DS4P43632 304 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 RPL31P62899 125 aaKnown RBP8.55□□□□□ -1.04
LSM4-205ENST00000597776 RIPPLY1Q0D2K3 151 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 SNAPC1Q16533 368 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 SMIM21Q3B7S5 101 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 PLA1AQ53H76 456 aa8.55□□□□□ -1.04
LSM4-205ENST00000597776 KCTD18Q6PI47 426 aaPredicted RBP8.55□□□□□ -1.04
LSM4-205ENST00000597776 LYG1Q8N1E2 194 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms