RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 DUX4L3P0CJ86 424 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 DUX4L4P0CJ87 422 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 DUX4L5P0CJ88 424 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 DUX4L6P0CJ89 424 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 DUX4L7P0CJ90 424 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 COMPP49747 757 aaPredicted RBP10.79□□□□□ -0.68
USE1-207ENST00000596136 ACTC1P68032 377 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 ACTA1P68133 377 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 PLCXD3Q63HM9 321 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 FDX2Q6P4F2 183 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 DUX4L9Q6RFH8 374 aaPredicted RBP10.79□□□□□ -0.68
USE1-207ENST00000596136 ENTHD1Q8IYW4 607 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 PRSS35Q8N3Z0 413 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 FAM216BQ8N7L0 139 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 SIGLECL1Q8N7X8 197 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 C8orf46Q8TAG6 207 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 C10orf35Q96D05 121 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 RNFT2Q96EX2 444 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
USE1-207ENST00000596136 WDFY2Q96P53 400 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 TBX15Q96SF7 602 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 MS4A7Q9GZW8 240 aaPredicted RBP10.79□□□□□ -0.68
USE1-207ENST00000596136 SIRPDQ9H106 197 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 CNTD2Q9H8S5 307 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 FAM118AQ9NWS6 357 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 RASL12Q9NYN1 266 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 NLKQ9UBE8 527 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 DUX4Q9UBX2 424 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 RPUSD1Q9UJJ7 312 aaKnown RBP10.79□□□□□ -0.68
USE1-207ENST00000596136 ZNF222Q9UK12 451 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 PCDHGB1Q9Y5G3 927 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 GMPPBQ9Y5P6 360 aa10.79□□□□□ -0.68
USE1-207ENST00000596136 FBN3Q75N90 2809 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 IGKV1D-17A0A075B6S4 117 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 TRAV40A0A0B4J280 105 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 LOC100130705A0A1B0GUX0 176 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 PQLC2LA1A4F0 135 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 TMEM89A2RUT3 159 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 SNTNA6NMZ2 147 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 OR2AT4A6NND4 320 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 CLDN34H7C241 214 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 SIGLEC5O15389 551 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 NDUFB3O43676 98 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 GLRA1P23415 457 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 MPZP25189 248 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 UBA52P62987 128 aaKnown RBP10.78□□□□□ -0.68
USE1-207ENST00000596136 DMRTC1Q5HYR2 192 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 HAGHLQ6PII5 290 aaPredicted RBP10.78□□□□□ -0.68
USE1-207ENST00000596136 ZNF573Q86YE8 665 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 FGFRL1Q8N441 504 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 ACBD7Q8N6N7 88 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 POC1AQ8NBT0 407 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 OR5T2Q8NGG2 359 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 ST8SIA4Q92187 359 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 LGALS12Q96DT0 336 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 MED30Q96HR3 178 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 C1orf147Q96MC9 270 aaPredicted RBP10.78□□□□□ -0.68
USE1-207ENST00000596136 RDH12Q96NR8 316 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 ZMAT3Q9HA38 289 aaKnown RBP10.78□□□□□ -0.68
USE1-207ENST00000596136 ACOXLQ9NUZ1 547 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 MRPS18AQ9NVS2 196 aaKnown RBP10.78□□□□□ -0.68
USE1-207ENST00000596136 DNAJB11Q9UBS4 358 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 KPTNQ9Y664 436 aa10.78□□□□□ -0.68
USE1-207ENST00000596136 A0A1B0GVI7 797 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 DAPL1A0PJW8 107 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 J3QT63 122 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 SYT7O43581 403 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 TOX4O94842 621 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 ISG15P05161 165 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 SFTPBP07988 381 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 UBCP0CG48 685 aaKnown RBP10.77□□□□□ -0.69
USE1-207ENST00000596136 PGA5P0DJD9 388 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 PSG2P11465 335 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 PRTN3P24158 256 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 KIR3DL2P43630 455 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 CCR9P51686 369 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 CAV3P56539 151 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 IL13RA1P78552 427 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 PDCD1Q15116 288 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 TP53I3Q53FA7 332 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 LRRC10Q5BKY1 277 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
USE1-207ENST00000596136 C1orf122Q6ZSJ8 110 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 FAM220AQ7Z4H9 259 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 OR2G2Q8NGZ5 317 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 TMIGD2Q96BF3 282 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 SDSLQ96GA7 329 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 Q96MT0 163 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 ZNF649Q9BS31 505 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 DCTN5Q9BTE1 182 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 HES4Q9HCC6 221 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 GPR173Q9NS66 373 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 SNTG1Q9NSN8 517 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 AASSQ9UDR5 926 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 GNG8Q9UK08 70 aa10.77□□□□□ -0.69
USE1-207ENST00000596136 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 ANKRD61A6NGH8 418 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 A6NIN4 97 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms