RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 PTGES3Q15185 160 aaKnown RBP13.95□□□□□ -0.18
CCDC9-202ENST00000595659 PLCXD3Q63HM9 321 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 METAP1DQ6UB28 335 aaPredicted RBP13.95□□□□□ -0.18
CCDC9-202ENST00000595659 PLEKHG7Q6ZR37 379 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 Q6ZSV7 163 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 BATF2Q8N1L9 274 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 PAPD5Q8NDF8 572 aaKnown RBP13.95□□□□□ -0.18
CCDC9-202ENST00000595659 C8orf46Q8TAG6 207 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 SLC7A6OSQ96CW6 309 aaPredicted RBP13.95□□□□□ -0.18
CCDC9-202ENST00000595659 OR8B4Q96RC9 309 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 APOL4Q9BPW4 351 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 DNTTIP1Q9H147 329 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 ZNRD1Q9P1U0 126 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 DOCK11Q5JSL3 2073 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 A6NIN4 97 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 DNAJC8O75937 253 aaPredicted RBP13.94□□□□□ -0.18
CCDC9-202ENST00000595659 PAHP00439 452 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 PAX6P26367 422 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 EPHA2P29317 976 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 RIDAP52758 137 aaKnown RBP13.94□□□□□ -0.18
CCDC9-202ENST00000595659 CAPZA1P52907 286 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 GUCA2AQ02747 115 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 MIDNQ504T8 468 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 LCN1P1Q5VSP4 162 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 FAHD1Q6P587 224 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 DEGS2Q6QHC5 323 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 GDPGP1Q6ZNW5 385 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 ZNF679Q8IYX0 411 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 FAM185AQ8N0U4 392 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 OR5A2Q8NGI9 324 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 ZNF671Q8TAW3 534 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 C17orf50Q8WW18 174 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 AQP3Q92482 292 aa13.94□□□□□ -0.18
CCDC9-202ENST00000595659 CNN2Q99439 309 aaKnown RBP13.94□□□□□ -0.18
CCDC9-202ENST00000595659 CAB39Q9Y376 341 aaPredicted RBP13.94□□□□□ -0.18
CCDC9-202ENST00000595659 BTBD17A6NE02 478 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 H0YAE9 185 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 SYNGR1O43759 233 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 IGLV3-1P01715 115 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 TTRP02766 147 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 HOXB6P17509 224 aaKnown RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 CEBPDP49716 269 aaPredicted RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 CAV3P56539 151 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 RPL15P61313 204 aaKnown RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 ESRRGP62508 458 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 ROM1Q03395 351 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 DHRS7BQ6IAN0 325 aaPredicted RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 TCEANCQ8N8B7 351 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 ZSCAN4Q8NAM6 433 aaPredicted RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 NPRL2Q8WTW4 380 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 LRTOMTQ8WZ04 291 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 UTP4Q969X6 686 aaKnown RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 DMRTB1Q96MA1 342 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 METTL8Q9H825 291 aaKnown RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 GPR173Q9NS66 373 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 NUFIP1Q9UHK0 495 aaKnown RBP13.93□□□□□ -0.18
CCDC9-202ENST00000595659 ENPP5Q9UJA9 477 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 ZNF222Q9UK12 451 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 TMEM14AQ9Y6G1 99 aa13.93□□□□□ -0.18
CCDC9-202ENST00000595659 RFPL4AA6NLU0 287 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 LOC110117498-PIK3R3F6TDL0 507 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 RFPL4AL1F8VTS6 287 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 H3BSH0 61 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 M0R1W7 72 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 ANGPTL7O43827 346 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 ZNF254O75437 659 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 NRASP01111 189 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 UBE2E1P51965 193 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 PROK1P58294 105 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 CXCR4P61073 352 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 BLMHQ13867 455 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 ZNF829Q3KNS6 432 aaPredicted RBP13.92□□□□□ -0.18
CCDC9-202ENST00000595659 ZNF684Q5T5D7 378 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 ASPHD2Q6ICH7 369 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 ZNF322Q6U7Q0 402 aaPredicted RBP13.92□□□□□ -0.18
CCDC9-202ENST00000595659 MEPCEQ7L2J0 689 aaKnown RBP13.92□□□□□ -0.18
CCDC9-202ENST00000595659 KRT74Q7RTS7 529 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 SLC35F2Q8IXU6 374 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 CD177Q8N6Q3 437 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 OR5K1Q8NHB7 308 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 ASB17Q8WXJ9 295 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 RORBQ92753 470 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 NRBF2Q96F24 287 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 IL4I1Q96RQ9 567 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 PPA2Q9H2U2 334 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 C19orf12Q9NSK7 152 aa13.92□□□□□ -0.18
CCDC9-202ENST00000595659 H2AFY2Q9P0M6 372 aaPredicted RBP13.92□□□□□ -0.18
CCDC9-202ENST00000595659 OR5B21A6NL26 309 aa13.91□□□□□ -0.18
CCDC9-202ENST00000595659 M0QZ24 198 aa13.91□□□□□ -0.18
CCDC9-202ENST00000595659 SRSF10O75494 262 aaKnown RBP13.91□□□□□ -0.18
CCDC9-202ENST00000595659 MTRF1O75570 445 aaKnown RBP13.91□□□□□ -0.18
CCDC9-202ENST00000595659 DHRS3O75911 302 aa13.91□□□□□ -0.18
CCDC9-202ENST00000595659 CLPXO76031 633 aa13.91□□□□□ -0.18
CCDC9-202ENST00000595659 ATP6V1B1P15313 513 aa13.91□□□□□ -0.18
CCDC9-202ENST00000595659 HAAOP46952 286 aa13.91□□□□□ -0.18
CCDC9-202ENST00000595659 ERVFRD-1P60508 538 aa13.91□□□□□ -0.18
CCDC9-202ENST00000595659 NCR3LG1Q68D85 454 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms