RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 Q96MT0 163 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 TECTBQ96PL2 329 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 HIST1H2AAQ96QV6 131 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 CCL13Q99616 98 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 ALG8Q9BVK2 526 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 ISG20L2Q9H9L3 353 aaKnown RBP9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 FRRS1LQ9P0K9 344 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 NKX1-2Q9UD57 310 aaPredicted RBP9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 METRNQ9UJH8 293 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 AUP1Q9Y679 476 aa9.12□□□□□ -0.95
SHKBP1-206ENST00000595523 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 A0A1B0GVI7 797 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 DVL1O14640 695 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 SYT7O43581 403 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 SYNGR1O43759 233 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 SELLP14151 372 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 NPY4RP50391 375 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 ACTA2P62736 377 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 ACTG2P63267 376 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 UBE2V2Q15819 145 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 MICBQ29980 383 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 ATPAF1Q5TC12 328 aaPredicted RBP9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 HAGHLQ6PII5 290 aaPredicted RBP9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 KCTD20Q7Z5Y7 419 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 PHC2Q8IXK0 858 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 OR10AC1Q8NH08 325 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 NANPQ8TBE9 248 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 CYGBQ8WWM9 190 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 C12orf43Q96C57 262 aaKnown RBP9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF488Q96MN9 340 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 NUDT16L1Q9BRJ7 211 aaKnown RBP9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 C8orf4Q9NR00 106 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 SNTG1Q9NSN8 517 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 ERVK13-1Q9NX77 482 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 ERVK-18Q9QC07 812 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 PCDHGB1Q9Y5G3 927 aa9.11□□□□□ -0.95
SHKBP1-206ENST00000595523 IGKV1D-17A0A075B6S4 117 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 IGKV1-27A0A075B6S5 117 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 ANKRD61A6NGH8 418 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 OR4C45A6NMZ5 311 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 RNF212BA8MTL3 300 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 E9PI62 339 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 J3QLW9 94 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 TCF21O43680 179 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 RGS9O75916 674 aaPredicted RBP9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 VENTXO95231 258 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 FADS2O95864 444 aaKnown RBP9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 ISG15P05161 165 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 GNAO1P09471 354 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 UBCP0CG48 685 aaKnown RBP9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 LIMS3P0CW19 117 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 LIMS4P0CW20 117 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 PPIAL4GP0DN37 164 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF19P17023 458 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 MPZP25189 248 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 HAAOP46952 286 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 TGM4P49221 684 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 LAIR2Q6ISS4 152 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 BTNL3Q6UXE8 466 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF788Q6ZQV5 615 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 CALHM1Q8IU99 346 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 SYS1Q8N2H4 156 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 TEX29Q8N6K0 151 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 OR51A4Q8NGJ6 313 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 ANGPTL6Q8NI99 470 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 C22orf15Q8WYQ4 148 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 UPRTQ96BW1 309 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 ADAT3Q96EY9 351 aaPredicted RBP9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 GAFA1Q96PS6 74 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 SLC6A7Q99884 636 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 MRI1Q9BV20 369 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 JAM3Q9BX67 310 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 CHST5Q9GZS9 411 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 FGF20Q9NP95 211 aaPredicted RBP9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF222Q9UK12 451 aa9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 RPL36Q9Y3U8 105 aaKnown RBP9.1□□□□□ -0.95
SHKBP1-206ENST00000595523 IGKV1-9A0A0C4DH69 117 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 OR2AT4A6NND4 320 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 J3QT63 122 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ENSAO43768 121 aaKnown RBP9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 HTR1AP08908 422 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 PGA5P0DJD9 388 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 IGHV4-38-2P0DP08 117 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 MMP9P14780 707 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 GLRA1P23415 457 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ETV1P50549 477 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 CCR9P51686 369 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 FGF12P61328 243 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ALKBH1Q13686 389 aaKnown RBP9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 DGUOKQ16854 277 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 KLHL22Q53GT1 634 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ARMCX4Q5H9R4 360 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 TTC23Q5W5X9 447 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 BTN2A1Q7KYR7 527 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ANGPTL5Q86XS5 388 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 BCL6BQ8N143 479 aaPredicted RBP9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 DHRSXQ8N5I4 330 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 POC1AQ8NBT0 407 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms