RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PTGES3LE9PB15 166 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 H3BSH0 61 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 ZNF205O95201 554 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 WNT2P09544 360 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 RBMXP38159 391 aaKnown RBP21.57■■□□□ 1.04
TRIM28-204ENST00000594806 FUT6P51993 359 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 GTF2A1P52655 376 aaPredicted RBP21.57■■□□□ 1.04
TRIM28-204ENST00000594806 NANOGP1Q8N7R0 232 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 BOLLQ8N9W6 283 aaKnown RBP21.57■■□□□ 1.04
TRIM28-204ENST00000594806 DNAAF1Q8NEP3 725 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 TMEM186Q96B77 213 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 C12orf43Q96C57 262 aaKnown RBP21.57■■□□□ 1.04
TRIM28-204ENST00000594806 PDCD1LG2Q9BQ51 273 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 CDCA4Q9BXL8 241 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 ERVK-18Q9QC07 812 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 LRCH1Q9Y2L9 728 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 RPS2P15880 293 aaKnown RBP21.56■■□□□ 1.04
TRIM28-204ENST00000594806 WNT4P56705 351 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 SLC35A2P78381 396 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 UBE2V2Q15819 145 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 MICBQ29980 383 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 AQP3Q92482 292 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 FGGYQ96C11 551 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 SMIM19Q96E16 107 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 ADAT3Q96EY9 351 aaPredicted RBP21.56■■□□□ 1.04
TRIM28-204ENST00000594806 NEIL1Q96FI4 390 aaPredicted RBP21.56■■□□□ 1.04
TRIM28-204ENST00000594806 CNBD2Q96M20 576 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 DUSP21Q9H596 190 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 METTL17Q9H7H0 456 aaPredicted RBP21.56■■□□□ 1.04
TRIM28-204ENST00000594806 NEK6Q9HC98 313 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 POLDIP2Q9Y2S7 368 aa21.56■■□□□ 1.04
TRIM28-204ENST00000594806 POLR3KQ9Y2Y1 108 aaPredicted RBP21.56■■□□□ 1.04
TRIM28-204ENST00000594806 NSD1Q96L73 2696 aaPredicted RBP21.56■■□□□ 1.04
TRIM28-204ENST00000594806 PRKACBP22694 351 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 ESCO2Q56NI9 601 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 RBM48Q5RL73 367 aaKnown RBP21.55■■□□□ 1.04
TRIM28-204ENST00000594806 SFRP4Q6FHJ7 346 aaPredicted RBP21.55■■□□□ 1.04
TRIM28-204ENST00000594806 HAGHLQ6PII5 290 aaPredicted RBP21.55■■□□□ 1.04
TRIM28-204ENST00000594806 DEFB108BQ8NET1 73 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 OR8B3Q8NGG8 313 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 OR10AC1Q8NH08 325 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 GPR148Q8TDV2 347 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 OR8B2Q96RD0 313 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 BLOC1S6Q9UL45 172 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 DHDHQ9UQ10 334 aa21.55■■□□□ 1.04
TRIM28-204ENST00000594806 SONP18583 2426 aaKnown RBP21.55■■□□□ 1.04
TRIM28-204ENST00000594806 PPIAL4CA0A0B4J2A2 164 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 A8MXK9 166 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 INAFM1C9JVW0 142 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 C3orf80F5H4A9 247 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 J3QT63 122 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 PLPP2O43688 288 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 ALX3O95076 343 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 GATA3P23771 443 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 CD80P33681 288 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 HAAOP46952 286 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 DMRTC1Q5HYR2 192 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 DMKNQ6E0U4 476 aaPredicted RBP21.54■■□□□ 1.04
TRIM28-204ENST00000594806 XAF1Q6GPH4 301 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 SERPINA12Q8IW75 414 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 PARP16Q8N5Y8 322 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 OR51A4Q8NGJ6 313 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 OR5D14Q8NGL3 314 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 SPSB1Q96BD6 273 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 BORCS8Q96FH0 119 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 MND1Q9BWT6 205 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 PKIBQ9C010 78 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 RASL12Q9NYN1 266 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 LPAR3Q9UBY5 353 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 ZNF281Q9Y2X9 895 aa21.54■■□□□ 1.04
TRIM28-204ENST00000594806 FN1P02751 2386 aaKnown RBP21.53■■□□□ 1.04
TRIM28-204ENST00000594806 WNK2Q9Y3S1 2297 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 TNFRSF13BO14836 293 aaPredicted RBP21.53■■□□□ 1.04
TRIM28-204ENST00000594806 DENRO43583 198 aaKnown RBP21.53■■□□□ 1.04
TRIM28-204ENST00000594806 ACAA1P09110 424 aaPredicted RBP21.53■■□□□ 1.04
TRIM28-204ENST00000594806 EGR1P18146 543 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 ATF1P18846 271 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 CRHBPP24387 322 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 MPZP25189 248 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 NPY4RP50391 375 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 BDH1Q02338 343 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 TSEN15Q8WW01 171 aaKnown RBP21.53■■□□□ 1.04
TRIM28-204ENST00000594806 HIF1ANQ9NWT6 349 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 KAAG1Q9UBP8 84 aa21.53■■□□□ 1.04
TRIM28-204ENST00000594806 NOS1APO75052 506 aaPredicted RBP21.52■■□□□ 1.04
TRIM28-204ENST00000594806 LALBAP00709 142 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 MT-ND2P03891 347 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 CD1AP06126 327 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 CD2P06729 351 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 GLRA1P23415 457 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 RBP2P50120 134 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 ATP1B3P54709 279 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 ACSM1Q08AH1 577 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 FAM90A1Q86YD7 464 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 C19orf18Q8NEA5 215 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 SSBP3Q9BWW4 388 aaPredicted RBP21.52■■□□□ 1.04
TRIM28-204ENST00000594806 DNTTIP1Q9H147 329 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 ZCCHC4Q9H5U6 513 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 LPAR2Q9HBW0 351 aa21.52■■□□□ 1.04
TRIM28-204ENST00000594806 DNAJB11Q9UBS4 358 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms