RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 VSIG10L2P0DP72 767 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 PAICSP22234 425 aaKnown RBP13.27□□□□□ -0.29
LIG1-205ENST00000593425 BMXP51813 675 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 ERVFRD-1P60508 538 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 FAM189A2Q15884 450 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 LCN8Q6JVE9 175 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 C11orf88Q6PI97 169 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 KRT74Q7RTS7 529 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 CD177Q8N6Q3 437 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 OR5K1Q8NHB7 308 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 FAM81AQ8TBF8 368 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 PIFOQ8TCI5 191 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 AQP3Q92482 292 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 HIST1H2AAQ96QV6 131 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 FEVQ99581 238 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 NIPAL2Q9H841 368 aa13.27□□□□□ -0.29
LIG1-205ENST00000593425 MTRF1O75570 445 aaKnown RBP13.26□□□□□ -0.29
LIG1-205ENST00000593425 CCL3L1P16619 93 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 COX7A1P24310 79 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 MAP2K3P46734 347 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 CEBPDP49716 269 aaPredicted RBP13.26□□□□□ -0.29
LIG1-205ENST00000593425 CAPZA1P52907 286 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 HCCSP53701 268 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 AANATQ16613 207 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 CEACAM21Q3KPI0 293 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 HAGHLQ6PII5 290 aaPredicted RBP13.26□□□□□ -0.29
LIG1-205ENST00000593425 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 TRPM8Q7Z2W7 1104 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 THAP5Q7Z6K1 395 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 BBS1Q8NFJ9 593 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 GIPC3Q8TF64 312 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 ZNF488Q96MN9 340 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 RAB18Q9NP72 206 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 FAM206AQ9NX38 181 aa13.26□□□□□ -0.29
LIG1-205ENST00000593425 RFPL4AA6NLU0 287 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 RFPL4AL1F8VTS6 287 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 PSMD9O00233 223 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 PIN1P1O15428 100 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 PRODHO43272 600 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 ALOX5APP20292 161 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 MS4A2Q01362 244 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 HABP2Q14520 560 aaPredicted RBP13.25□□□□□ -0.29
LIG1-205ENST00000593425 ZNF273Q14593 569 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 GINS1Q14691 196 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 FAM98BQ52LJ0 330 aaKnown RBP13.25□□□□□ -0.29
LIG1-205ENST00000593425 TMEM200BQ69YZ2 307 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 MOB3CQ70IA8 216 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 KRT77Q7Z794 578 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 LHFPL4Q7Z7J7 247 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 TMEM179BQ7Z7N9 219 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 DHFR2Q86XF0 187 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 DYNAPQ8N1N2 210 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 OR4M1Q8NGD0 313 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 ZNF671Q8TAW3 534 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 NKX3-1Q99801 234 aaPredicted RBP13.25□□□□□ -0.29
LIG1-205ENST00000593425 NPFFR1Q9GZQ6 430 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 ZNF702PQ9H963 129 aa13.25□□□□□ -0.29
LIG1-205ENST00000593425 A0A0U1RQV5 110 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 OR5B21A6NL26 309 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 PRR32B1ATL7 298 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 SYNGR1O43759 233 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 IGLV3-1P01715 115 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 FAHP16930 419 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 SLC2A5P22732 501 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 RPL31P62899 125 aaKnown RBP13.24□□□□□ -0.29
LIG1-205ENST00000593425 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 PLA1AQ53H76 456 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 OXLD1Q5BKU9 147 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 PLCXD3Q63HM9 321 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 LIAT1Q6ZQX7 453 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 CPOQ8IVL8 374 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 BATF2Q8N1L9 274 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 POC1AQ8NBT0 407 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 OR5A2Q8NGI9 324 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 PPP1R14AQ96A00 147 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 MUC13Q9H3R2 512 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 HEXA-AS1Q9H8Q6 139 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 SERTAD4Q9NUC0 356 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 LAMP5Q9UJQ1 280 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 ZNF281Q9Y2X9 895 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 ARL2BPQ9Y2Y0 163 aa13.24□□□□□ -0.29
LIG1-205ENST00000593425 TMEM269A0A1B0GVZ9 245 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 ARRDC5A6NEK1 342 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 FBXO24O75426 580 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 CD28P10747 220 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 RPS7P62081 194 aaKnown RBP13.23□□□□□ -0.29
LIG1-205ENST00000593425 TRIM25Q14258 630 aaKnown RBP13.23□□□□□ -0.29
LIG1-205ENST00000593425 SMIM21Q3B7S5 101 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 SLC35D3Q5M8T2 416 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 CCBE1Q6UXH8 406 aaPredicted RBP13.23□□□□□ -0.29
LIG1-205ENST00000593425 ZNF782Q6ZMW2 699 aaPredicted RBP13.23□□□□□ -0.29
LIG1-205ENST00000593425 REC114Q7Z4M0 266 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 COMMD2Q86X83 199 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 ZNF561Q8N587 486 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 TTTY10Q9BZA0 68 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 PBOV1Q9GZY1 135 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 MMP28Q9H239 520 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 GPR84Q9NQS5 396 aa13.23□□□□□ -0.29
LIG1-205ENST00000593425 RASL12Q9NYN1 266 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms