RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 APH1AQ96BI3 265 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 PCED1AQ9H1Q7 454 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 TMEM218A2RU14 115 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 DFFBO76075 338 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 MMP16P51512 607 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 MIDNQ504T8 468 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 RPL7L1Q6DKI1 246 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 CNEP1R1Q8N9A8 125 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 MFRPQ9BY79 579 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 NPDC1Q9NQX5 325 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 A0A0U1RQK1 487 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 DEGS1O15121 323 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 HAAOP46952 286 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 ASCL1P50553 236 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 CEACAM16Q2WEN9 425 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 GGNBP1Q5YKI7 109 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 SPSB1Q96BD6 273 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 NIT2Q9NQR4 276 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 MRPL22Q9NWU5 206 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 LMX1BO60663 402 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 FSTP19883 344 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 BCKDHBP21953 392 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 FUT6P51993 359 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 CLDN15P56746 228 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 ERVK-16P61578 105 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 KIAA0141Q14154 515 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 LHFPL5Q8TAF8 219 aa15.17■□□□□ 0.02
SMARCA4-215ENST00000590574 URB1O60287 2271 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 NXPH2O95156 264 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 TTRP02766 147 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 PRSS12P56730 875 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 EGR4Q05215 589 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 RDH5Q92781 318 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 C19orf12Q9NSK7 152 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 A6NCN8 305 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 ZNF345Q14585 488 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 RAB35Q15286 201 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 OR5AS1Q8N127 324 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 EP400Q96L91 3159 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 SUCNR1Q9BXA5 334 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 PLK3Q9H4B4 646 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 SLC39A9Q9NUM3 307 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 RASL12Q9NYN1 266 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 IGLV1-36A0A0B4J1U3 117 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 SLC25A4P12235 298 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 LTC4SQ16873 150 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 NHLRC3Q5JS37 347 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 ZNF774Q6NX45 483 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 ZNF816-ZNF321PA0A0X1KG74 233 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 ADAM11O75078 769 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 RAB11AP62491 216 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 C17orf51A8MQB3 221 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 TSPAN2O60636 221 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 CTXN2P0C2S0 81 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 ROM1Q03395 351 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 RGS7BPQ6MZT1 257 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 OVCH2Q7RTZ1 564 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 FOXB1Q99853 325 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 LHX6Q9UPM6 363 aa15.16■□□□□ 0.02
SMARCA4-215ENST00000590574 SIGLEC5O15389 551 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 SIGLEC14Q08ET2 396 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 STPG2Q8N412 459 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 FRZBQ92765 325 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 PTX4Q96A99 478 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 DNAJB11Q9UBS4 358 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 FBXL17Q9UF56 701 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 PRSS44E7EML9 344 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 H3BMH7 237 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 LYPD3O95274 346 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 LANCL2Q9NS86 450 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 RFC3P40938 356 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 BAXQ07812 192 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 DRAM2Q6UX65 266 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 CD46P15529 392 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 CATR1Q13166 79 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 C6orf15Q6UXA7 325 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 RBMS3Q6XE24 437 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 CBLN2Q8IUK8 224 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 ADIPOR1Q96A54 375 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 GNPNAT1Q96EK6 184 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 ZNF426Q9BUY5 554 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 UQCC1Q9NVA1 299 aa15.15■□□□□ 0.02
SMARCA4-215ENST00000590574 RAB27BO00194 218 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 ELLP55199 621 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 GUK1Q16774 197 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 JMJD6Q6NYC1 403 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 PPP1R3CQ9UQK1 317 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 A0A1W2PPV4 95 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 TGFBR3LH3BV60 316 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 HLA-BQ31612 363 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 OR8G2PQ6IF36 304 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 PLEKHF2Q9H8W4 249 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 OR5AC1P0C628 307 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 IGLV3-21P80748 117 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 CLEC9AQ6UXN8 241 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 OR2V1Q8NHB1 315 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 PIK3IP1Q96FE7 263 aa15.14■□□□□ 0.01
SMARCA4-215ENST00000590574 GNG13Q9P2W3 67 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms