RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 H3BUI4 141 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 SEMG1P04279 462 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 ARG1P05089 322 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 ZNF3P17036 446 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 DCTDP32321 178 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 MSX2P35548 267 aaPredicted RBP12.3□□□□□ -0.44
ACTN4-211ENST00000589528 GNG3P63215 75 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 SMIM21Q3B7S5 101 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 TMEM200BQ69YZ2 307 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 LINC00471Q8N535 108 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 ZNF561Q8N587 486 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 OR4M1Q8NGD0 313 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 OR2T27Q8NH04 317 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 SDSLQ96GA7 329 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 WWC2-AS2Q96NR7 200 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 OCSTAMPQ9BR26 566 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 GORASP2Q9H8Y8 452 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 IL20Q9NYY1 176 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 MAGEL2Q9UJ55 1249 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 BAIAP2Q9UQB8 552 aa12.3□□□□□ -0.44
ACTN4-211ENST00000589528 MEGF11A6BM72 1044 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 RFPL4AA6NLU0 287 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 E9PQ18 207 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 RFPL4AL1F8VTS6 287 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 F2RL2O00254 374 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 CLIC3O95833 236 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 CCL3L1P16619 93 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 GSTT1P30711 240 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 OPRL1P41146 370 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 SSX2Q16385 188 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 CEP78Q5JTW2 689 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 CCBE1Q6UXH8 406 aaPredicted RBP12.29□□□□□ -0.44
ACTN4-211ENST00000589528 RASSF6Q6ZTQ3 369 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 COMMD2Q86X83 199 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 WFDC9Q8NEX5 89 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 OR2T33Q8NG76 320 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 OR5AU1Q8NGC0 362 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 OR8D4Q8NGM9 314 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 OR13D1Q8NGV5 346 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 RCC1LQ96I51 464 aaKnown RBP12.29□□□□□ -0.44
ACTN4-211ENST00000589528 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 NMNAT2Q9BZQ4 307 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 WNT10AQ9GZT5 417 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 IL1RAPQ9NPH3 570 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 RASL12Q9NYN1 266 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 ZNF222Q9UK12 451 aa12.29□□□□□ -0.44
ACTN4-211ENST00000589528 TBL2Q9Y4P3 447 aaKnown RBP12.29□□□□□ -0.44
ACTN4-211ENST00000589528 A6NDX4 124 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 TNFRSF11BO00300 401 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 KRT36O76013 467 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 SOX14O95416 240 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 DUS4LO95620 317 aaKnown RBP12.28□□□□□ -0.44
ACTN4-211ENST00000589528 LYNP07948 512 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 MAP2K3P46734 347 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 OR12D2P58182 307 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 DYNC1I2Q13409 638 aaKnown RBP12.28□□□□□ -0.44
ACTN4-211ENST00000589528 TMEM95Q3KNT9 176 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 KHDC1LQ5JSQ8 128 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 HAGHLQ6PII5 290 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-211ENST00000589528 ACP7Q6ZNF0 438 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 DYNAPQ8N1N2 210 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 WIPF2Q8TF74 440 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-211ENST00000589528 THEM6Q8WUY1 208 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 DPF1Q92782 380 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 CMTM5Q96DZ9 223 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 MALSU1Q96EH3 234 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 LYZL4Q96KX0 146 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 NSMCE2Q96MF7 247 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 FGF23Q9GZV9 251 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-211ENST00000589528 OR51I2Q9H344 312 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 VIPAS39Q9H9C1 493 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 ARMC1Q9NVT9 282 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 DSCAML1Q8TD84 2053 aa12.28□□□□□ -0.44
ACTN4-211ENST00000589528 TCRBV4S1A1TA0A5B7 111 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 FAM90A8PA6NJQ4 464 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 SYNGR1O43759 233 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 MTRF1O75570 445 aaKnown RBP12.27□□□□□ -0.45
ACTN4-211ENST00000589528 CCNB2O95067 398 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 PIPP12273 146 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-211ENST00000589528 ZNF273Q14593 569 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 CEACAM21Q3KPI0 293 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 CENPVQ7Z7K6 275 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-211ENST00000589528 CALHM1Q8IU99 346 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 AQP3Q92482 292 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 AMELYQ99218 206 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 MUC13Q9H3R2 512 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 MED20Q9H944 212 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 TSSC4Q9Y5U2 329 aaPredicted RBP12.27□□□□□ -0.45
ACTN4-211ENST00000589528 LYVE1Q9Y5Y7 322 aa12.27□□□□□ -0.45
ACTN4-211ENST00000589528 WI2-2373I1.2A0A1W2PRP0 233 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 OR5B21A6NL26 309 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 FAM183AA6NL82 134 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 GASTP01350 101 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 H2AFXP16104 143 aaPredicted RBP12.26□□□□□ -0.45
ACTN4-211ENST00000589528 PRDX2P32119 198 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 CEBPDP49716 269 aaPredicted RBP12.26□□□□□ -0.45
ACTN4-211ENST00000589528 BLCAPP62952 87 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 CD83Q01151 205 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 DMRTC1Q5HYR2 192 aa12.26□□□□□ -0.45
ACTN4-211ENST00000589528 LINC01590Q5TEZ4 76 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms