RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 OR5B21A6NL26 309 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 ZNF732B4DXR9 585 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 CD40LGP29965 261 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 IL18Q14116 193 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 TMEM255AQ5JRV8 349 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 ZFAND2BQ8WV99 257 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 PTX4Q96A99 478 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 MICU1Q9BPX6 476 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 ADAT1Q9BUB4 502 aaKnown RBP19.02■□□□□ 0.64
ATG4D-209ENST00000588857 RTL8AQ9BWD3 113 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 SLC22A4Q9H015 551 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 CA10Q9NS85 328 aa19.02■□□□□ 0.64
ATG4D-209ENST00000588857 PLATP00750 562 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 CD3EP07766 207 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 NAT2P11245 290 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 ALDH3B1P43353 468 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 GNG3P63215 75 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 MADCAM1Q13477 382 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 DCTN2Q13561 401 aaKnown RBP19.02■□□□□ 0.63
ATG4D-209ENST00000588857 OR8G1Q15617 311 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 ADAM5Q6NVV9 412 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 PHF21AQ96BD5 680 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 ELL3Q9HB65 397 aaPredicted RBP19.02■□□□□ 0.63
ATG4D-209ENST00000588857 RAB22AQ9UL26 194 aa19.02■□□□□ 0.63
ATG4D-209ENST00000588857 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-209ENST00000588857 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-209ENST00000588857 LDLRAD4O15165 306 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 IGHV3-13P01766 116 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 VSIG8P0DPA2 414 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 RAB6AP20340 208 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 PTBP1P26599 531 aaKnown RBP eCLIP19.01■□□□□ 0.63
ATG4D-209ENST00000588857 EFNB2P52799 333 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 ZP1P60852 638 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 PLA2G7Q13093 441 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 BEX5Q5H9J7 111 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 OR10K2Q6IF99 312 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 OR2W3Q7Z3T1 314 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 DTX3Q8N9I9 347 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 KCNG3Q8TAE7 436 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 CST11Q9H112 138 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 NPDC1Q9NQX5 325 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-209ENST00000588857 NKIRAS2Q9NYR9 191 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 FBLN5Q9UBX5 448 aa19.01■□□□□ 0.63
ATG4D-209ENST00000588857 A1L4Q6 167 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 VSTM5A8MXK1 200 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 PITPNBP48739 271 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 QRFPP83859 136 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 PDZK1IP1Q13113 114 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 MSMPQ1L6U9 139 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 SLC22A6Q4U2R8 563 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 PYDC2Q56P42 97 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 C16orf87Q6PH81 154 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 BAIAP2L2Q6UXY1 529 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 C1QL2Q7Z5L3 287 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 LRP11Q86VZ4 500 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 OR13G1Q8NGZ3 307 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 FAM46BQ96A09 425 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 SOSTQ9BQB4 213 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 SYT3Q9BQG1 590 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 FGF23Q9GZV9 251 aaPredicted RBP19■□□□□ 0.63
ATG4D-209ENST00000588857 METTL9Q9H1A3 318 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 ATG5Q9H1Y0 275 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 ZNF442Q9H7R0 627 aa19■□□□□ 0.63
ATG4D-209ENST00000588857 PLSCR5A0PG75 271 aa18.99■□□□□ 0.63
ATG4D-209ENST00000588857 SPRY1O43609 319 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-209ENST00000588857 CLDN1O95832 211 aa18.99■□□□□ 0.63
ATG4D-209ENST00000588857 HAAOP46952 286 aa18.99■□□□□ 0.63
ATG4D-209ENST00000588857 RSU1Q15404 277 aa18.99■□□□□ 0.63
ATG4D-209ENST00000588857 ZNF573Q86YE8 665 aa18.99■□□□□ 0.63
ATG4D-209ENST00000588857 MRPL24Q96A35 216 aaKnown RBP18.99■□□□□ 0.63
ATG4D-209ENST00000588857 C1orf147Q96MC9 270 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-209ENST00000588857 DIABLOQ9NR28 239 aa18.99■□□□□ 0.63
ATG4D-209ENST00000588857 ICE1Q9Y2F5 2266 aa18.99■□□□□ 0.63
ATG4D-209ENST00000588857 IGLV3-9A0A075B6K5 115 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 METTL21EPA6NDL7 271 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 TMEM14DPA8MWL7 114 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 ANGPTL7O43827 346 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 CTAG2O75638 210 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 CRTAPO75718 401 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-209ENST00000588857 NR4A2P43354 598 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 UNC119Q13432 240 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 GPR176Q14439 515 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 ZNF79Q15937 498 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 TMEM69Q5SWH9 247 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 CALHM1Q8IU99 346 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 ZNF611Q8N823 705 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 MSL2Q9HCI7 577 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 RABL2AQ9UBK7 228 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-209ENST00000588857 RABL2BQ9UNT1 228 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 MRPS7Q9Y2R9 242 aaKnown RBP18.98■□□□□ 0.63
ATG4D-209ENST00000588857 A0A0G2JMP0 313 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 A0A0X1KG70 313 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 MPIG6BO95866 241 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 CYB5AP00167 134 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 CDK2P24941 298 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 KIR2DL3P43628 341 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 PITPNAQ00169 270 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 FAM189A2Q15884 450 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 PYHIN1Q6K0P9 492 aa18.98■□□□□ 0.63
ATG4D-209ENST00000588857 SLC25A26Q70HW3 274 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms