RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PRDM13Q9H4Q3 707 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 ZMAT3Q9HA38 289 aaKnown RBP8.69□□□□□ -1.02
TPM4-209ENST00000588483 C8orf4Q9NR00 106 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 INPP5EQ9NRR6 644 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 ACOXLQ9NUZ1 547 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 MRPS18AQ9NVS2 196 aaKnown RBP8.69□□□□□ -1.02
TPM4-209ENST00000588483 FAM118AQ9NWS6 357 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 RASL12Q9NYN1 266 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 NLKQ9UBE8 527 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 ZNF69Q9UC07 566 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 ZNF222Q9UK12 451 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 GTF2A1LQ9UNN4 478 aa8.69□□□□□ -1.02
TPM4-209ENST00000588483 IGHV3OR15-7A0A075B7D8 119 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 J3QT63 122 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 SIGLEC5O15389 551 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 AKR7A2O43488 359 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 RPP14O95059 124 aaKnown RBP8.68□□□□□ -1.02
TPM4-209ENST00000588483 ISG15P05161 165 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 PGA5P0DJD9 388 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 IGHV4-38-2P0DP08 117 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 DBTP11182 482 aaKnown RBP8.68□□□□□ -1.02
TPM4-209ENST00000588483 KIR3DL2P43630 455 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 COMPP49747 757 aaPredicted RBP8.68□□□□□ -1.02
TPM4-209ENST00000588483 CCR9P51686 369 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 CAV3P56539 151 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 FGF12P61328 243 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 ACTA2P62736 377 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 ACTG2P63267 376 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 RAB40BQ12829 278 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 MOB3CQ70IA8 216 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 BTN2A1Q7KYR7 527 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 ZNF573Q86YE8 665 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 SYS1Q8N2H4 156 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 ACBD7Q8N6N7 88 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 FAM216BQ8N7L0 139 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 ZDHHC22Q8N966 263 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 POC1AQ8NBT0 407 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 OR2G2Q8NGZ5 317 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 APH1BQ8WW43 257 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 STMN2Q93045 179 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 SEH1LQ96EE3 360 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 Q96MT0 163 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 GAFA1Q96PS6 74 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 MYCBPQ99417 103 aaPredicted RBP8.68□□□□□ -1.02
TPM4-209ENST00000588483 CCL13Q99616 98 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 ZNF649Q9BS31 505 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 JAM3Q9BX67 310 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 PKIBQ9C010 78 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 CHST5Q9GZS9 411 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 SIRPDQ9H106 197 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 HES4Q9HCC6 221 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 ESM1Q9NQ30 184 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 SMPD3Q9NY59 655 aaPredicted RBP8.68□□□□□ -1.02
TPM4-209ENST00000588483 DNAJB11Q9UBS4 358 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 RPUSD1Q9UJJ7 312 aaKnown RBP8.68□□□□□ -1.02
TPM4-209ENST00000588483 GNG8Q9UK08 70 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 KPTNQ9Y664 436 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 FBN3Q75N90 2809 aa8.68□□□□□ -1.02
TPM4-209ENST00000588483 IGKV1D-17A0A075B6S4 117 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 TRAV40A0A0B4J280 105 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 A0A1B0GVI7 797 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 A0A1B0GW55 424 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 LOC107986453A0A1B0GWG9 222 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 DAPL1A0PJW8 107 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 ANKRD61A6NGH8 418 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 NKX6-3A6NJ46 265 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 OR2AT4A6NND4 320 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 CLDN34H7C241 214 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 TRIM77I1YAP6 450 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 SYT7O43581 403 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 GATBO75879 557 aaKnown RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 DUX4L2P0CJ85 424 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 DUX4L3P0CJ86 424 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 DUX4L4P0CJ87 422 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 DUX4L5P0CJ88 424 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 DUX4L6P0CJ89 424 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 DUX4L7P0CJ90 424 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 GLRA1P23415 457 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 ERVK11-1P61568 191 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 ELF3P78545 371 aaPredicted RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 IL13RA1P78552 427 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 IL24Q13007 206 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 GALEQ14376 348 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 TP53I3Q53FA7 332 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 LRRC10Q5BKY1 277 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 TMEM244Q5VVB8 128 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 LPCAT4Q643R3 524 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 HAGHLQ6PII5 290 aaPredicted RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 DUX4L9Q6RFH8 374 aaPredicted RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 METAP1DQ6UB28 335 aaPredicted RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 KIR3DL3Q8N743 410 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 PACRGLQ8N7B6 248 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 PP6455Q8WZ26 134 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 SDSLQ96GA7 329 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 MRPL48Q96GC5 212 aaKnown RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 MED30Q96HR3 178 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 ZNF48Q96MX3 618 aaPredicted RBP8.67□□□□□ -1.02
TPM4-209ENST00000588483 WDFY2Q96P53 400 aa8.67□□□□□ -1.02
TPM4-209ENST00000588483 TBX15Q96SF7 602 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms