RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 OR2G6Q5TZ20 316 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 Q6ZSR3 168 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 MOGAT3Q86VF5 341 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 ZDHHC23Q8IYP9 409 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 ZNF676Q8N7Q3 588 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 OR14K1Q8NGZ2 314 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 OR52N1Q8NH53 320 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 ERGIC1Q969X5 290 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 MICU1Q9BPX6 476 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 V9GYS6 101 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 DOCK11Q5JSL3 2073 aa13.11□□□□□ -0.31
NCLN-203ENST00000587740 LOC107986453A0A1B0GWG9 222 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 DHRS7CA6NNS2 312 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 E9PI62 339 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 H3BSH0 61 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 ISG15P05161 165 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 RPSAP08865 295 aaKnown RBP13.1□□□□□ -0.31
NCLN-203ENST00000587740 FAHP16930 419 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 RBMXP38159 391 aaKnown RBP13.1□□□□□ -0.31
NCLN-203ENST00000587740 GATA4P43694 442 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 PRAMEF6Q5VXH4 476 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
NCLN-203ENST00000587740 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 RDH10Q8IZV5 341 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 OR5AK2Q8NH90 309 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 ZNF420Q8TAQ5 688 aaPredicted RBP13.1□□□□□ -0.31
NCLN-203ENST00000587740 GATAD2BQ8WXI9 593 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 RAB1CQ92928 201 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 RTL8AQ9BWD3 113 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 COMMD4Q9H0A8 199 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 PPP1R3EQ9H7J1 279 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 FN3KRPQ9HA64 309 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 PLEKHA1Q9HB21 404 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 TMEM106BQ9NUM4 274 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 BABAM2Q9NXR7 383 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 NUP50Q9UKX7 468 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 ERGIC3Q9Y282 383 aa13.1□□□□□ -0.31
NCLN-203ENST00000587740 PPIAL4EA0A075B759 164 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 PPIAL4CA0A0B4J2A2 164 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 TRBV2A0A0J9YWF9 115 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 TMEM212A6NML5 194 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 PPIAL4DF5H284 164 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 DENRO43583 198 aaKnown RBP13.09□□□□□ -0.31
NCLN-203ENST00000587740 NRASP01111 189 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 GRPP07492 148 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 RNASE1P07998 156 aaKnown RBP13.09□□□□□ -0.31
NCLN-203ENST00000587740 PPIAL4FP0DN26 164 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 IRF2P14316 349 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
NCLN-203ENST00000587740 SLC35A2P78381 396 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 IL13RA1P78552 427 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 CCDC58Q4VC31 144 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 RBM48Q5RL73 367 aaKnown RBP13.09□□□□□ -0.31
NCLN-203ENST00000587740 CLVS2Q5SYC1 327 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 RPL22L1Q6P5R6 122 aaKnown RBP13.09□□□□□ -0.31
NCLN-203ENST00000587740 MOB3CQ70IA8 216 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 OR11L1Q8NGX0 322 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 OR5P3Q8WZ94 311 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 SLITRK2Q9H156 845 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 TRIM36Q9NQ86 728 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 UFSP2Q9NUQ7 469 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 HHLA2Q9UM44 414 aa13.09□□□□□ -0.31
NCLN-203ENST00000587740 A6NIN4 97 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 A6NLC8 198 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 TRAPPC2LH3BP13 241 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 PTBP3O95758 552 aaKnown RBP13.08□□□□□ -0.32
NCLN-203ENST00000587740 MDKP21741 143 aaPredicted RBP13.08□□□□□ -0.32
NCLN-203ENST00000587740 WNT4P56705 351 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 SRSF4Q08170 494 aaKnown RBP13.08□□□□□ -0.32
NCLN-203ENST00000587740 BAMBIQ13145 260 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 MPPED2Q15777 294 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 ZNF181Q2M3W8 571 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 CEACAM21Q3KPI0 293 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 CEP78Q5JTW2 689 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 RNLSQ5VYX0 342 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 PLCXD3Q63HM9 321 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 KCTD8Q6ZWB6 473 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 NANOGP1Q8N7R0 232 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 C10orf35Q96D05 121 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 RNF170Q96K19 258 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 MND1Q9BWT6 205 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 DUSP21Q9H596 190 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 ZMAT3Q9HA38 289 aaKnown RBP13.08□□□□□ -0.32
NCLN-203ENST00000587740 PAK1IP1Q9NWT1 392 aaPredicted RBP13.08□□□□□ -0.32
NCLN-203ENST00000587740 DCAF16Q9NXF7 216 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 PCDHGB5Q9Y5G0 923 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 NPTNQ9Y639 398 aa13.08□□□□□ -0.32
NCLN-203ENST00000587740 SOX21Q9Y651 276 aaPredicted RBP13.08□□□□□ -0.32
NCLN-203ENST00000587740 ISPDA4D126 451 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 TMEM210A6NLX4 147 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms