RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 STMND1H3BQB6 276 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 SCRG1O75711 98 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 OR2J2O76002 312 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 HOXB5P09067 269 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 FCGR2AP12318 317 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 MUC1P15941 1255 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF708P17019 499 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 CLDN17P56750 224 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 RNF144BQ7Z419 303 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 RTN4RL2Q86UN3 420 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 SLC25A45Q8N413 288 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 SLC38A9Q8NBW4 561 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 SEMA6DQ8NFY4 1073 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 OR51F2Q8NH61 342 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 LYPD6BQ8NI32 183 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 SHDQ96IW2 340 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 ZC3H10Q96K80 434 aaKnown RBP16.3■□□□□ 0.2
DDX39A-206ENST00000587730 PRRX2Q99811 253 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 DEFB126Q9BYW3 111 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 ACKR4Q9NPB9 350 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 BORCS7-ASMTA0A0B4J1R7 106 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 SDCBPO00560 298 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-206ENST00000587730 BCAT2O15382 392 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-206ENST00000587730 SERPINA5P05154 406 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 FCGR3AP08637 254 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 SFTA3P0C7M3 94 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 PDZK1IP1Q13113 114 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 PEA15Q15121 130 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF528Q3MIS6 628 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 RPL7L1Q6DKI1 246 aaKnown RBP16.29■□□□□ 0.2
DDX39A-206ENST00000587730 SOX7Q9BT81 388 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 CRB3Q9BUF7 120 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 RNF122Q9H9V4 155 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF701Q9NV72 531 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-206ENST00000587730 PLEKHJ1Q9NW61 149 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 E5RGE8 158 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 DKK1O94907 266 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 KNG1P01042 644 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 SERPINA2P20848 420 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 PTGER4P35408 488 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 RAB5CP51148 216 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 H3F3AP84243 136 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 TSC22D1Q15714 1073 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 GPR157Q5UAW9 335 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 C15orf54Q8N8G6 183 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 LYZL4Q96KX0 146 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 Q96M66 194 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 RASL10BQ96S79 203 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 SULT4A1Q9BR01 284 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 METTL9Q9H1A3 318 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 NECAP2Q9NVZ3 263 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 ANXA10Q9UJ72 324 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 NXT1Q9UKK6 140 aaKnown RBP16.29■□□□□ 0.2
DDX39A-206ENST00000587730 PADI1Q9ULC6 663 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 NSG2Q9Y328 171 aa16.29■□□□□ 0.2
DDX39A-206ENST00000587730 PCNX3Q9H6A9 2034 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 RP1P56715 2156 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 PMS2P1A4D2B8 440 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 SFTPDP35247 375 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 LPAR6P43657 344 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 NPBWR1P48145 328 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 SUCLG1P53597 346 aaKnown RBP16.28■□□□□ 0.2
DDX39A-206ENST00000587730 SRSF3P84103 164 aaKnown RBP16.28■□□□□ 0.2
DDX39A-206ENST00000587730 CNN3Q15417 329 aaKnown RBP16.28■□□□□ 0.2
DDX39A-206ENST00000587730 SMAD2Q15796 467 aaKnown RBP16.28■□□□□ 0.2
DDX39A-206ENST00000587730 UBE2V2Q15819 145 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 GALNT14Q96FL9 552 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 POM121Q96HA1 1249 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 OR6C1Q96RD1 312 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF2Q9BSG1 426 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-206ENST00000587730 SUCNR1Q9BXA5 334 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF391Q9UJN7 358 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 PIGLQ9Y2B2 252 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 MUC3AQ02505 3323 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 PCDH15Q96QU1 1955 aa16.28■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF814B7Z6K7 855 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 FCGR2CP31995 323 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 RAB5BP61020 215 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 ENDOGQ14249 297 aaKnown RBP16.27■□□□□ 0.2
DDX39A-206ENST00000587730 LRTM2Q8N967 370 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 WDSUB1Q8N9V3 476 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 OR9K2Q8NGE7 335 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 DUSP23Q9BVJ7 150 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 ARV1Q9H2C2 271 aa16.27■□□□□ 0.2
DDX39A-206ENST00000587730 ELL3Q9HB65 397 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-206ENST00000587730 NPIPA2E9PIF3 369 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 F5H5K5 113 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 NPIPA3F8WFD2 350 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 M0R135 149 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 DHHO43323 396 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 DNPH1O43598 174 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 FARS2O95363 451 aaKnown RBP16.26■□□□□ 0.19
DDX39A-206ENST00000587730 SEC11BP0C7V7 166 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 AKR1D1P51857 326 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 CTAG1AP78358 180 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 ZNF385CQ66K41 422 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-206ENST00000587730 CRIP3Q6Q6R5 217 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 DHRS11Q6UWP2 260 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 ZNF799Q96GE5 643 aa16.26■□□□□ 0.19
DDX39A-206ENST00000587730 KIRREL1Q96J84 757 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms