RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 FOXJ3Q9UPW0 622 aa7.05□□□□□ -1.28
SDF2-204ENST00000587338 EXOGQ9Y2C4 368 aaKnown RBP7.05□□□□□ -1.28
SDF2-204ENST00000587338 EXOSC1Q9Y3B2 195 aaKnown RBP7.05□□□□□ -1.28
SDF2-204ENST00000587338 EPPK1P58107 5090 aaKnown RBP7.05□□□□□ -1.28
SDF2-204ENST00000587338 ZNF670-ZNF695F2Z2N8 137 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 SGCEO43556 437 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 AHCYL1O43865 530 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 TFAP2AP05549 437 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 COX5BP10606 129 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 RPL5P46777 297 aaKnown RBP7.04□□□□□ -1.28
SDF2-204ENST00000587338 ETV1P50549 477 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 BLVRAP53004 296 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 ARF6P62330 175 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 ACTC1P68032 377 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 ACTA1P68133 377 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 HOXA4Q00056 320 aaPredicted RBP7.04□□□□□ -1.28
SDF2-204ENST00000587338 SCRN3Q0VDG4 424 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 NSUN5P1Q3KNT7 163 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 FOXB2Q5VYV0 432 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 CCBE1Q6UXH8 406 aaPredicted RBP7.04□□□□□ -1.28
SDF2-204ENST00000587338 C1orf122Q6ZSJ8 110 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 GPR141Q7Z602 305 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 ZBTB46Q86UZ6 589 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 SATL1Q86VE3 508 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 KLHDC1Q8N7A1 406 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 BOLLQ8N9W6 283 aaKnown RBP7.04□□□□□ -1.28
SDF2-204ENST00000587338 OR4S1Q8NGB4 309 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 OR11L1Q8NGX0 322 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 FNDC8Q8TC99 324 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 THEM6Q8WUY1 208 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 INTS14Q96SY0 518 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 MND1Q9BWT6 205 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 ADGRL4Q9HBW9 690 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 SMURF1Q9HCE7 757 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 EMC7Q9NPA0 242 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 ACOT13Q9NPJ3 140 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 POLE4Q9NR33 117 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 FBLN5Q9UBX5 448 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 POLR1DQ9Y2S0 133 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 CAB39Q9Y376 341 aaPredicted RBP7.04□□□□□ -1.28
SDF2-204ENST00000587338 BOLA1Q9Y3E2 137 aa7.04□□□□□ -1.28
SDF2-204ENST00000587338 IGLV1-36A0A0B4J1U3 117 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 A0A1W2PRD5 423 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 A0A1W2PRF3 423 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 A0A1W2PRM7 423 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 DPPA5A6NC42 116 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 J3QLW9 94 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 ZNF593O00488 134 aaPredicted RBP7.03□□□□□ -1.28
SDF2-204ENST00000587338 ADAM20O43506 726 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 INMTO95050 263 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 PAHP00439 452 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 HLA-DPB1P04440 258 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 SCG5P05408 212 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 OR2T7P0C7T2 308 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 ZNF19P17023 458 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 RPS27P42677 84 aaKnown RBP7.03□□□□□ -1.28
SDF2-204ENST00000587338 EFNB2P52799 333 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 MEP1BQ16820 701 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 LINC01590Q5TEZ4 76 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 OR2G6Q5TZ20 316 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 SFRP4Q6FHJ7 346 aaPredicted RBP7.03□□□□□ -1.28
SDF2-204ENST00000587338 FBXW12Q6X9E4 464 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 TMPRSS11AQ6ZMR5 421 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 FOXL2NBQ6ZUU3 175 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 ZNF367Q7RTV3 350 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 SLC16A9Q7RTY1 509 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 VMO1Q7Z5L0 202 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 SYT9Q86SS6 491 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 GLB1L2Q8IW92 636 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 NANOGP1Q8N7R0 232 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 OR2T27Q8NH04 317 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 CFHR4Q92496 578 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 FCGR1BQ92637 280 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 MRPL48Q96GC5 212 aaKnown RBP7.03□□□□□ -1.28
SDF2-204ENST00000587338 WWC2-AS2Q96NR7 200 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 ALG8Q9BVK2 526 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 CDCA4Q9BXL8 241 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 WDR76Q9H967 626 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 BATF3Q9NR55 127 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 UFSP2Q9NUQ7 469 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 ERVK13-1Q9NX77 482 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 HAO2Q9NYQ3 351 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 LAMP5Q9UJQ1 280 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 STAB2Q8WWQ8 2551 aa7.03□□□□□ -1.28
SDF2-204ENST00000587338 PNMA8CA0A1B0GUJ8 204 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 A0A1W2PQL4 384 aaPredicted RBP7.02□□□□□ -1.29
SDF2-204ENST00000587338 TRIM64CA6NLI5 447 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 RNASEK-C17orf49H0YIS7 233 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 K7EIL1 84 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 LGALS8O00214 317 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 PSMD9O00233 223 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 NOL3O60936 208 aaKnown RBP7.02□□□□□ -1.29
SDF2-204ENST00000587338 IGHA1P01876 353 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 DBHP09172 617 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 LIMS3P0CW19 117 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 LIMS4P0CW20 117 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 VSIG10L2P0DP72 767 aa7.02□□□□□ -1.29
SDF2-204ENST00000587338 JUNBP17275 347 aaPredicted RBP7.02□□□□□ -1.29
SDF2-204ENST00000587338 GATA4P43694 442 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms