RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 LAMP5Q9UJQ1 280 aa12.39□□□□□ -0.43
PRKCSH-204ENST00000587290 COPS3Q9UNS2 423 aa12.39□□□□□ -0.43
PRKCSH-204ENST00000587290 FOXJ3Q9UPW0 622 aa12.39□□□□□ -0.43
PRKCSH-204ENST00000587290 ARRDC5A6NEK1 342 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 H0YAE9 185 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 M0R129 80 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 M0R1W7 72 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 GNGT2O14610 69 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 PRODHO43272 600 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 ATP8B1O43520 1251 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 OSMP13725 252 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 CAPZA1P52907 286 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 CAV3P56539 151 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 CDK5Q00535 292 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 MFGE8Q08431 387 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 SNCBQ16143 134 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 HAGHLQ6PII5 290 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 MOB3CQ70IA8 216 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 TRPM8Q7Z2W7 1104 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 MKXQ8IYA7 352 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 ARHGAP24Q8N264 748 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 OR51E1Q8TCB6 317 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 HIST1H2AAQ96QV6 131 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 SSX3Q99909 188 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 GPR84Q9NQS5 396 aa12.38□□□□□ -0.43
PRKCSH-204ENST00000587290 MEX3AA1L020 520 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 MEGF11A6BM72 1044 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 CCDC182A6NF36 153 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 MAGEB4O15481 346 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 SYNGR1O43759 233 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 E2F6O75461 281 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 GABRA5P31644 462 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 TGFBR2P37173 567 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 GNG3P63215 75 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 C2orf68Q2NKX9 166 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 PLCXD3Q63HM9 321 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 NCR3LG1Q68D85 454 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 PLEKHG7Q6ZR37 379 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 BCDIN3DQ7Z5W3 292 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 CD177Q8N6Q3 437 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 BEND2Q8NDZ0 799 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 OR4M1Q8NGD0 313 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 AQP3Q92482 292 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 TEAD3Q99594 435 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 THTPAQ9BU02 230 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 PBOV1Q9GZY1 135 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 ABCB9Q9NP78 766 aa12.37□□□□□ -0.43
PRKCSH-204ENST00000587290 TMEM269A0A1B0GVZ9 245 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 A6NIN4 97 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 RFPL4AA6NLU0 287 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 RFPL4AL1F8VTS6 287 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 CHST1O43916 411 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 CSF1P09603 554 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 CCL3L1P16619 93 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 CALB2P22676 271 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 COX7A1P24310 79 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 MAP2K3P46734 347 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 BMXP51813 675 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 CEACAM21Q3KPI0 293 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 PLA1AQ53H76 456 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 THAP5Q7Z6K1 395 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 LYG1Q8N1E2 194 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 OR51G2Q8NGK0 314 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 OR5R1Q8NH85 324 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 DMRTB1Q96MA1 342 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 TVP23BQ9NYZ1 205 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 GTF2A1LQ9UNN4 478 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 PIGLQ9Y2B2 252 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
PRKCSH-204ENST00000587290 A0A0G2JK05 382 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 A0A0U1RQV5 110 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 G3V4G9 280 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 IGLV3-1P01715 115 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 PRB2P02812 416 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 HMGN1P05114 100 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 ACSM1Q08AH1 577 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 BLMHQ13867 455 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 SLC35D3Q5M8T2 416 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 ZNF782Q6ZMW2 699 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 ACP7Q6ZNF0 438 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 SDSLQ96GA7 329 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 ZNF556Q9HAH1 456 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 SLC25A19Q9HC21 320 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 GPR173Q9NS66 373 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 IKZF2Q9UKS7 526 aa12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 SF3B6Q9Y3B4 125 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-204ENST00000587290 TRBV23-1A0A0A0MS06 115 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 OR5B21A6NL26 309 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 H3BSH0 61 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 PRKYO43930 277 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 MTRF1O75570 445 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 TTRP02766 147 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 EFNB2P52799 333 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 RIPPLY1Q0D2K3 151 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 GK3PQ14409 553 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 ZNF273Q14593 569 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 SNAPC1Q16533 368 aa12.34□□□□□ -0.43
PRKCSH-204ENST00000587290 LRRC75BQ2VPJ9 315 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms