RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CD79AP11912 226 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 CXCL3P19876 107 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 SERPINA2P20848 420 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 C4BPBP20851 252 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 DNASE1P24855 282 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 ACKR3P25106 362 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 OR3A2P47893 321 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 CLN3Q13286 438 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 ARFRP1Q13795 201 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 RSU1Q15404 277 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 MPPED2Q15777 294 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 VAX1Q5SQQ9 334 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 FBXW9Q5XUX1 488 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 CRIP3Q6Q6R5 217 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 ASCL4Q6XD76 172 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 RNF144BQ7Z419 303 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 CCDC36Q8IYA8 594 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 ZSCAN4Q8NAM6 433 aaPredicted RBP9.78□□□□□ -0.84
LIG3-204ENST00000585740 CSNK2A3Q8NEV1 391 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 PXT1Q8NFP0 134 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 OR1K1Q8NGR3 316 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 ZNF431Q8TF32 576 aaPredicted RBP9.78□□□□□ -0.84
LIG3-204ENST00000585740 NPRL2Q8WTW4 380 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 NUDCD2Q8WVJ2 157 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 SARAFQ96BY9 339 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 CMBLQ96DG6 245 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 MRPS24Q96EL2 167 aaKnown RBP9.78□□□□□ -0.84
LIG3-204ENST00000585740 SCGB3A2Q96PL1 93 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 ELL3Q9HB65 397 aaPredicted RBP9.78□□□□□ -0.84
LIG3-204ENST00000585740 B3GNT2Q9NY97 397 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 IL36GQ9NZH8 169 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 EIF3KQ9UBQ5 218 aaKnown RBP9.78□□□□□ -0.84
LIG3-204ENST00000585740 TNRC6AQ8NDV7 1962 aaKnown RBP9.77□□□□□ -0.84
LIG3-204ENST00000585740 OR14I1A6ND48 311 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 FOXI3A8MTJ6 420 aaPredicted RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 AKR7A2O43488 359 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 SSX5O60225 188 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 C1QL1O75973 258 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 CSTBP04080 98 aaKnown RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 FCER2P06734 321 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 GSTT2P0CG29 244 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 EDN3P14138 238 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 BLVRBP30043 206 aaPredicted RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 APLNRP35414 380 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 EIF2S3P41091 472 aaKnown RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 TMEM50BP56557 158 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 CXADRP78310 365 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 TGFBR3Q03167 851 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 ZNF92Q03936 586 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 CAMK2BQ13554 666 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 SF3B4Q15427 424 aaKnown RBP eCLIP9.77□□□□□ -0.85
LIG3-204ENST00000585740 C3AR1Q16581 482 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 DEFB109BQ30KR1 87 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 PLAC9Q5JTB6 97 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 RNFT1Q5M7Z0 435 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 FAHD2BQ6P2I3 314 aaPredicted RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 MOB3CQ70IA8 216 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 NLRC3Q7RTR2 1065 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 MRPL21Q7Z2W9 205 aaKnown RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 TMEM17Q86X19 198 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 FTMTQ8N4E7 242 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 ZADH2Q8N4Q0 377 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 ARRDC1Q8N5I2 433 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 CPEB3Q8NE35 698 aaKnown RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 OR5D18Q8NGL1 313 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 OR5L1Q8NGL2 311 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 OR4K15Q8NH41 348 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 SNAPC3Q92966 411 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 FAHD2AQ96GK7 314 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 ARHGAP5-AS1Q96IT6 56 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 SLC6A7Q99884 636 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 REPIN1Q9BWE0 567 aaKnown RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 PECRQ9BY49 303 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 POFUT1Q9H488 388 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 CLCF1Q9UBD9 225 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 ELF5Q9UKW6 265 aaPredicted RBP9.77□□□□□ -0.85
LIG3-204ENST00000585740 MGAT4AQ9UM21 535 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 KCNK7Q9Y2U2 307 aa9.77□□□□□ -0.85
LIG3-204ENST00000585740 MED12LQ86YW9 2145 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 A0A096LPE4 126 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 A0A1W2PP11 408 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 FAM230AA0A1W2PPH8 454 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 A0A1W2PPZ6 126 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 SMLR1H3BR10 107 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 H3BUI4 141 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 J3QW42 95 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 RGS11O94810 467 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 OR2A4O95047 310 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 HTR3BO95264 441 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 CNOT4O95628 575 aaKnown RBP9.76□□□□□ -0.85
LIG3-204ENST00000585740 CST4P01036 141 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 HLA-HP01893 362 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 OR4E1P0C645 316 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 PLA2G2AP14555 144 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
LIG3-204ENST00000585740 TAS2R31P59538 309 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 TAS2R46P59540 309 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
LIG3-204ENST00000585740 RAB1AP62820 205 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 SRSF6Q13247 344 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms