RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	BOLL	Q8N9W6	283 aa	Known RBP	13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	AQP3	Q92482	292 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	TFAP2C	Q92754	450 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	CHST5	Q9GZS9	411 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	ISG20L2	Q9H9L3	353 aa	Known RBP	13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	CTSZ	Q9UBR2	303 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	CLN8	Q9UBY8	286 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	OR5V1	Q9UGF6	321 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	OPN4	Q9UHM6	478 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	INSIG2	Q9Y5U4	225 aa		13.54	□□□□□ -0.24
ERBB2-222	ENST00000584908	PQLC2L	A1A4F0	135 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	IRGM	A1A4Y4	181 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	ANKRD61	A6NGH8	418 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	FSHB	P01225	129 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	ALKBH1	Q13686	389 aa	Known RBP	13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	C1QL2	Q7Z5L3	287 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	RDH10	Q8IZV5	341 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	NRG4	Q8WWG1	115 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	TECTB	Q96PL2	329 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	DNTTIP1	Q9H147	329 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	PLEKHA1	Q9HB21	404 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	GPR173	Q9NS66	373 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	ERVK-18	Q9QC07	812 aa		13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	DIMT1	Q9UNQ2	313 aa	Known RBP	13.53	□□□□□ -0.24
ERBB2-222	ENST00000584908	ADAM20	O43506	726 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	NOS1AP	O75052	506 aa	Predicted RBP	13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	RHBDL1	O75783	438 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	GYPA	P02724	150 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	RPSA	P08865	295 aa	Known RBP	13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	PPIAL4G	P0DN37	164 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	MPZ	P25189	248 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	TGM4	P49221	684 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	PAX8	Q06710	450 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	DMRTC1	Q5HYR2	192 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	STUM	Q69YW2	141 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	LAIR2	Q6ISS4	152 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	ZNF573	Q86YE8	665 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	ZNF671	Q8TAW3	534 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	RAB40A	Q8WXH6	277 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	PP6455	Q8WZ26	134 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	WDR13	Q9H1Z4	485 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	C7orf69	Q9H7B7	122 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	PLCXD1	Q9NUJ7	323 aa		13.52	□□□□□ -0.25
ERBB2-222	ENST00000584908	IGHV3OR15-7	A0A075B7D8	119 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	IGHV2-70D	A0A0C4DH43	119 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	KIR2DS1	A0A191URI9	304 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908		A6NIN4	97 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908		J3QT63	122 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	AKR7A2	O43488	359 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	FCN3	O75636	299 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	GATB	O75879	557 aa	Known RBP	13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	ACAA1	P09110	424 aa	Predicted RBP	13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	PIP	P12273	146 aa	Predicted RBP	13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	SRP14	P37108	136 aa	Known RBP	13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	UBE2V2	Q15819	145 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	HAGHL	Q6PII5	290 aa	Predicted RBP	13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	UTS2B	Q765I0	119 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	RPS4Y2	Q8TD47	263 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	SEH1L	Q96EE3	360 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	SMURF1	Q9HCE7	757 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	RASL12	Q9NYN1	266 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	HHLA2	Q9UM44	414 aa		13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	CAB39	Q9Y376	341 aa	Predicted RBP	13.51	□□□□□ -0.25
ERBB2-222	ENST00000584908	LOC105371242	A0A075B767	164 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	TMEM212	A6NML5	194 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908		E9PI62	339 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	PGA5	P0DJD9	388 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	AMY2B	P19961	511 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	HAAO	P46952	286 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	ETV1	P50549	477 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	GBX2	P52951	348 aa	Predicted RBP	13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	CCDC58	Q4VC31	144 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	CD276	Q5ZPR3	534 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	POC1A	Q8NBT0	407 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	ANGPTL6	Q8NI99	470 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	GGH	Q92820	318 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	ADAT3	Q96EY9	351 aa	Predicted RBP	13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	PKIB	Q9C010	78 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	CNOT2	Q9NZN8	540 aa	Known RBP	13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	AUP1	Q9Y679	476 aa		13.5	□□□□□ -0.25
ERBB2-222	ENST00000584908	C22orf46	C9J442	243 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908		H3BSH0	61 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	TMPRSS2	O15393	492 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	ZFPL1	O95159	310 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	SERPINA3	P01011	423 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	CCDC159	P0C7I6	412 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	GLRA1	P23415	457 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	FUT6	P51993	359 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	SCGB2A2	Q13296	93 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	BTNL3	Q6UXE8	466 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	ZNF788	Q6ZQV5	615 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	SLC36A1	Q7Z2H8	476 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	ZNF676	Q8N7Q3	588 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	DNAAF1	Q8NEP3	725 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	OR51A4	Q8NGJ6	313 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	OR10AC1	Q8NH08	325 aa		13.49	□□□□□ -0.25
ERBB2-222	ENST00000584908	NANP	Q8TBE9	248 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms