RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	AASS	Q9UDR5	926 aa		11.02	□□□□□ -0.65
SREBF1-223	ENST00000584760	GMPPB	Q9Y5P6	360 aa		11.02	□□□□□ -0.65
SREBF1-223	ENST00000584760	DLGAP1	O14490	977 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	SELL	P14151	372 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	MMP9	P14780	707 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	FPR2	P25090	351 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	GMFB	P60983	142 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	FGF12	P61328	243 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ACTC1	P68032	377 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ACTA1	P68133	377 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZNF91	Q05481	1191 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	CDON	Q4KMG0	1287 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	TP53I3	Q53FA7	332 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	CLVS2	Q5SYC1	327 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZBTB49	Q6ZSB9	765 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	C9orf139	Q6ZV77	190 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	MOB3C	Q70IA8	216 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	SLC36A1	Q7Z2H8	476 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	PRSS35	Q8N3Z0	413 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZDHHC22	Q8N966	263 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ANGPTL6	Q8NI99	470 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	AQP3	Q92482	292 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZNF48	Q96MX3	618 aa	Predicted RBP	11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	DNTTIP1	Q9H147	329 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	SNTG1	Q9NSN8	517 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	GNG8	Q9UK08	70 aa		11.01	□□□□□ -0.65
SREBF1-223	ENST00000584760	IGHV3OR16-10	A0A075B7F0	116 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760		A6NIN4	97 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZNF879	B4DU55	563 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	ECD	O95905	644 aa	Predicted RBP	11	□□□□□ -0.65
SREBF1-223	ENST00000584760	LIPF	P07098	398 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	SFTPB	P07988	381 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	KIR3DL2	P43630	455 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	TGM4	P49221	684 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZSCAN26	Q16670	478 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	HAGHL	Q6PII5	290 aa	Predicted RBP	11	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZNF788	Q6ZQV5	615 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	BTN2A1	Q7KYR7	527 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	FAM220A	Q7Z4H9	259 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	SIGLECL1	Q8N7X8	197 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	PNLDC1	Q8NA58	520 aa	Known RBP	11	□□□□□ -0.65
SREBF1-223	ENST00000584760	OR5T2	Q8NGG2	359 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	ST8SIA4	Q92187	359 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	C1orf147	Q96MC9	270 aa	Predicted RBP	11	□□□□□ -0.65
SREBF1-223	ENST00000584760	GAFA1	Q96PS6	74 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	TBX15	Q96SF7	602 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZNF747	Q9BV97	191 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZNF696	Q9H7X3	374 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	GPR173	Q9NS66	373 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	NLK	Q9UBE8	527 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	DNAJB11	Q9UBS4	358 aa		11	□□□□□ -0.65
SREBF1-223	ENST00000584760	RPUSD1	Q9UJJ7	312 aa	Known RBP	11	□□□□□ -0.65
SREBF1-223	ENST00000584760	EXOG	Q9Y2C4	368 aa	Known RBP	11	□□□□□ -0.65
SREBF1-223	ENST00000584760	IGKV1D-17	A0A075B6S4	117 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	LOC100130705	A0A1B0GUX0	176 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760		A0A1B0GVI7	797 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	LOC107986453	A0A1B0GWG9	222 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	PQLC2L	A1A4F0	135 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	ANKRD61	A6NGH8	418 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	NKX6-3	A6NJ46	265 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	SNTN	A6NMZ2	147 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	OR2AT4	A6NND4	320 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760		H3BSH0	61 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760		J3QT63	122 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	SLC16A6	O15403	523 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	SYT7	O43581	403 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	MPZL2	O60487	215 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	TFF1	P04155	84 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	UBC	P0CG48	685 aa	Known RBP	10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	DBT	P11182	482 aa	Known RBP	10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	GLRA1	P23415	457 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	ODF4	Q2M2E3	257 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	FDX2	Q6P4F2	183 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	SHISA2	Q6UWI4	295 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	POC1A	Q8NBT0	407 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	LY6G5B	Q8NDX9	201 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	OR2G2	Q8NGZ5	317 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	RHOXF1	Q8NHV9	184 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	STMN2	Q93045	179 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	LGALS12	Q96DT0	336 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	RDH12	Q96NR8	316 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	WDFY2	Q96P53	400 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	SIRPD	Q9H106	197 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	PLEKHA1	Q9HB21	404 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	FAM118A	Q9NWS6	357 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	ZNF222	Q9UK12	451 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	SOX21	Q9Y651	276 aa	Predicted RBP	10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	DSCAML1	Q8TD84	2053 aa		10.99	□□□□□ -0.65
SREBF1-223	ENST00000584760	DAPL1	A0PJW8	107 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	DNAJC9-AS1	A6NH13	148 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	GPR37	O15354	613 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	SIGLEC5	O15389	551 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	NDUFB3	O43676	98 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	SYNGR1	O43759	233 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	TOX4	O94842	621 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	BAG2	O95816	211 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	IGHA1	P01876	353 aa		10.98	□□□□□ -0.65
SREBF1-223	ENST00000584760	PGA5	P0DJD9	388 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms