RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ZNF85Q03923 595 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 OCLNQ16625 522 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 C11orf91Q3C1V1 193 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 TP53I3Q53FA7 332 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 LRRC10Q5BKY1 277 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 SLC25A30Q5SVS4 291 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 GPR157Q5UAW9 335 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 METTL11BQ5VVY1 283 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 TMIGD2Q96BF3 282 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 SLC29A1Q99808 456 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 NLKQ9UBE8 527 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 RPUSD1Q9UJJ7 312 aaKnown RBP16.91■□□□□ 0.3
SS18-224ENST00000584083 SOX21Q9Y651 276 aaPredicted RBP16.91■□□□□ 0.3
SS18-224ENST00000584083 DAPL1A0PJW8 107 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 OR2AT4A6NND4 320 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 DLGAP1O14490 977 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 SYT7O43581 403 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 TFF1P04155 84 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 AMY2BP19961 511 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 GABRA2P47869 451 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 TGM4P49221 684 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 ARF6P62330 175 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 UBA52P62987 128 aaKnown RBP16.9■□□□□ 0.3
SS18-224ENST00000584083 ACTC1P68032 377 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 ACTA1P68133 377 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 BAMBIQ13145 260 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 ATPAF1Q5TC12 328 aaPredicted RBP16.9■□□□□ 0.3
SS18-224ENST00000584083 BRD3OSQ6XYD6 125 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 AQP3Q92482 292 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 GCDHQ92947 438 aaPredicted RBP16.9■□□□□ 0.3
SS18-224ENST00000584083 STMN2Q93045 179 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 MED30Q96HR3 178 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 ZNF48Q96MX3 618 aaPredicted RBP16.9■□□□□ 0.3
SS18-224ENST00000584083 WDFY2Q96P53 400 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 DUX5Q96PT3 197 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 DNTTIP1Q9H147 329 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 PLEKHA1Q9HB21 404 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 ACOXLQ9NUZ1 547 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 AASSQ9UDR5 926 aa16.9■□□□□ 0.3
SS18-224ENST00000584083 DHRS7CA6NNS2 312 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 E9PQ18 207 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 SELLP14151 372 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 CCL1P22362 96 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 IL13RA1P78552 427 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 TUSC1Q2TAM9 212 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 TMEM42Q69YG0 159 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 C12orf54Q6X4T0 127 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 Q6ZSR3 168 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 C9orf139Q6ZV77 190 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 ZNF573Q86YE8 665 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 ANGPTL6Q8NI99 470 aa16.89■□□□□ 0.29
SS18-224ENST00000584083 H1FXQ92522 213 aaKnown RBP16.89■□□□□ 0.29
SS18-224ENST00000584083 DNAJC9-AS1A6NH13 148 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 GPR37O15354 613 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 MMP9P14780 707 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 HAAOP46952 286 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 ZNF788Q6ZQV5 615 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 PRSS35Q8N3Z0 413 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 GAFA1Q96PS6 74 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 TBX15Q96SF7 602 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 SIRPDQ9H106 197 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 ONECUT1Q9UBC0 465 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 PCDHGB1Q9Y5G3 927 aa16.88■□□□□ 0.29
SS18-224ENST00000584083 LOC100130705A0A1B0GUX0 176 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 PQLC2LA1A4F0 135 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 ANKRD61A6NGH8 418 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 J3QT63 122 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 HAX1O00165 279 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 MPZL2O60487 215 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 ACAA1P09110 424 aaPredicted RBP16.87■□□□□ 0.29
SS18-224ENST00000584083 PSG2P11465 335 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 BPIFB3P59826 476 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 PDCD1Q15116 288 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 KCTD20Q7Z5Y7 419 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 ENTHD1Q8IYW4 607 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 ACBD7Q8N6N7 88 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 CCDC54Q8NEL0 328 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 TRMT10AQ8TBZ6 339 aaKnown RBP16.87■□□□□ 0.29
SS18-224ENST00000584083 LHX4Q969G2 390 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 ZDHHC16Q969W1 377 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 ZNF488Q96MN9 340 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 Q96MT0 163 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 RASL12Q9NYN1 266 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.87■□□□□ 0.29
SS18-224ENST00000584083 SLC25A10Q9UBX3 287 aaPredicted RBP16.87■□□□□ 0.29
SS18-224ENST00000584083 SLC7A11Q9UPY5 501 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 POLDIP2Q9Y2S7 368 aa16.87■□□□□ 0.29
SS18-224ENST00000584083 FAM230AA0A1W2PPH8 454 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 J3QRE1 110 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 SIGLEC5O15389 551 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 SLC16A6O15403 523 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 SYNGR1O43759 233 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 UBCP0CG48 685 aaKnown RBP16.86■□□□□ 0.29
SS18-224ENST00000584083 NDUFB7P17568 137 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 PRTN3P24158 256 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 KIR3DL2P43630 455 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 OR12D2P58182 307 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 ISL1P61371 349 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 DGUOKQ16854 277 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms