RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 MS4A7Q9GZW8 240 aaPredicted RBP8.19□□□□□ -1.1
SKA2-208ENST00000583927 RPUSD1Q9UJJ7 312 aaKnown RBP8.19□□□□□ -1.1
SKA2-208ENST00000583927 SLC22A13Q9Y226 551 aa8.19□□□□□ -1.1
SKA2-208ENST00000583927 EXOGQ9Y2C4 368 aaKnown RBP8.19□□□□□ -1.1
SKA2-208ENST00000583927 IGHV3OR15-7A0A075B7D8 119 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 PQLC2LA1A4F0 135 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 SIGLEC5O15389 551 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 SLC16A6O15403 523 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 MAGEB4O15481 346 aaPredicted RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 AKR7A2O43488 359 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 ENTPD6O75354 484 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 TOX4O94842 621 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 ISG15P05161 165 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 RPSAP08865 295 aaKnown RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 UBCP0CG48 685 aaKnown RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 PGA5P0DJD9 388 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 ATP6V1E1P36543 226 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 CCR9P51686 369 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 UBA52P62987 128 aaKnown RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 IL13RA1P78552 427 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 ZNF85Q03923 595 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 CDONQ4KMG0 1287 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 LRRC10Q5BKY1 277 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 CEP78Q5JTW2 689 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 GPR157Q5UAW9 335 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 METTL11BQ5VVY1 283 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 PLCXD3Q63HM9 321 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 ZBTB49Q6ZSB9 765 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 KCTD8Q6ZWB6 473 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 MOB3CQ70IA8 216 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 SIGLECL1Q8N7X8 197 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 POC1AQ8NBT0 407 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 OR10H4Q8NGA5 316 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 RHOXF1Q8NHV9 184 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 UBE2FQ969M7 185 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 RNF166Q96A37 237 aaPredicted RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 Q96MT0 163 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 ZNF48Q96MX3 618 aaPredicted RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 WDFY2Q96P53 400 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 MBOAT4Q96T53 435 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 CCL13Q99616 98 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 SIRPDQ9H106 197 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 WDR13Q9H1Z4 485 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 CNTD2Q9H8S5 307 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 UNKLQ9H9P5 680 aaKnown RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 MRPS18AQ9NVS2 196 aaKnown RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.18□□□□□ -1.1
SKA2-208ENST00000583927 NLKQ9UBE8 527 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 DNAJB11Q9UBS4 358 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 ZNF222Q9UK12 451 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 KIAA2026Q5HYC2 2103 aa8.18□□□□□ -1.1
SKA2-208ENST00000583927 TRAV40A0A0B4J280 105 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 LOC100130705A0A1B0GUX0 176 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 NKX6-3A6NJ46 265 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 OR2AT4A6NND4 320 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 J3QT63 122 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 SYT7O43581 403 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 NDUFB3O43676 98 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 RHBDL1O75783 438 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 RPP14O95059 124 aaKnown RBP8.17□□□□□ -1.1
SKA2-208ENST00000583927 RNASE1P07998 156 aaKnown RBP8.17□□□□□ -1.1
SKA2-208ENST00000583927 PSG2P11465 335 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 GLRA1P23415 457 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 ZSCAN26Q16670 478 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 SMIM21Q3B7S5 101 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 TMEM244Q5VVB8 128 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 HAGHLQ6PII5 290 aaPredicted RBP8.17□□□□□ -1.1
SKA2-208ENST00000583927 FAM220AQ7Z4H9 259 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 ENTHD1Q8IYW4 607 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 BCL6BQ8N143 479 aaPredicted RBP8.17□□□□□ -1.1
SKA2-208ENST00000583927 PRSS35Q8N3Z0 413 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 ACBD7Q8N6N7 88 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 FAM216BQ8N7L0 139 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 NPRL2Q8WTW4 380 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 C22orf15Q8WYQ4 148 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 PP6455Q8WZ26 134 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 TMIGD2Q96BF3 282 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 SEH1LQ96EE3 360 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 SDSLQ96GA7 329 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 MRPL48Q96GC5 212 aaKnown RBP8.17□□□□□ -1.1
SKA2-208ENST00000583927 C1orf147Q96MC9 270 aaPredicted RBP8.17□□□□□ -1.1
SKA2-208ENST00000583927 GAFA1Q96PS6 74 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 TBX15Q96SF7 602 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 TBX5Q99593 518 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 SLC29A1Q99808 456 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 DCTN5Q9BTE1 182 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 PKIBQ9C010 78 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 RASSF4Q9H2L5 321 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 SEBOXQ9HB31 216 aaPredicted RBP8.17□□□□□ -1.1
SKA2-208ENST00000583927 HES4Q9HCC6 221 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 NOX4Q9NPH5 578 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 C8orf4Q9NR00 106 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 INPP5EQ9NRR6 644 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 GTF2A1LQ9UNN4 478 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 POLDIP2Q9Y2S7 368 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 GMPPBQ9Y5P6 360 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 NBEAL1Q6ZS30 2694 aa8.17□□□□□ -1.1
SKA2-208ENST00000583927 IGKV1D-17A0A075B6S4 117 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 TRBV23-1A0A0A0MS06 115 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 CENPVL3A0A0U1RRI6 287 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms