RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 OR5I1Q13606 314 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 SERTAD2Q14140 314 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 PYDC2Q56P42 97 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 FAM74A1Q5RGS3 127 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 BSPRYQ5W0U4 402 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 SLC25A48Q6ZT89 311 aaKnown RBP3.9□□□□□ -1.79
SS18-223ENST00000583595 SMIM5Q71RC9 77 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 NOTCH2NLQ7Z3S9 236 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 NAA40Q86UY6 237 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 PHF13Q86YI8 300 aaPredicted RBP3.9□□□□□ -1.79
SS18-223ENST00000583595 PROKR2Q8NFJ6 384 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 OR4A15Q8NGL6 344 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 OR5J2Q8NH18 312 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 CA5BP1Q8WTZ4 195 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 MRPS31Q92665 395 aaKnown RBP3.9□□□□□ -1.79
SS18-223ENST00000583595 ZNF501Q96CX3 271 aaPredicted RBP3.9□□□□□ -1.79
SS18-223ENST00000583595 ZNF599Q96NL3 588 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 MS4A4EQ96PG1 132 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 HBEGFQ99075 208 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 VAT1Q99536 393 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 LGMNQ99538 433 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 FAIM2Q9BWQ8 316 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 GABARAPL1Q9H0R8 117 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 OR51B6Q9H340 312 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 BEX1Q9HBH7 125 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 VAPAQ9P0L0 249 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 STOX2Q9P2F5 926 aaPredicted RBP3.9□□□□□ -1.79
SS18-223ENST00000583595 CACNG5Q9UF02 275 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 CDH10Q9Y6N8 788 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 V9GYQ6 96 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 C5P01031 1676 aa3.9□□□□□ -1.79
SS18-223ENST00000583595 RLFQ13129 1914 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 AFDNP55196 1824 aaKnown RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 NOTCH4Q99466 2003 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 IGLV4-3A0A075B6K6 122 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 KCNE1BA0A087WTH5 132 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 KBTBD11-OT1A0A1B0GTJ5 212 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 GNG14A0A1W2PPG7 69 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 PRSS37A4D1T9 235 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 TRAPPC13A5PLN9 417 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 DISC1C4P0D8 188 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 TSTD3H0UI37 97 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 M0QZ92 97 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 M0QZK8 103 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 DCTN6O00399 190 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SC5DO75845 299 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 AQP8O94778 261 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SNAI1O95863 264 aaPredicted RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 SERPINA1P01009 418 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SULT1A3P0DMM9 295 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SULT1A4P0DMN0 295 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 NR2C1P13056 603 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 GATA1P15976 413 aaPredicted RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 NPR2P20594 1047 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 DDTP30046 118 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SDC4P31431 198 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 PMELP40967 661 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 PTGDSP41222 190 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 CX3CR1P49238 355 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 ARRB1P49407 418 aaPredicted RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 INPP1P49441 399 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 PLK1P53350 603 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 BIDP55957 195 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SEMG2Q02383 582 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 RCAN2Q14206 197 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 MAD2L1BPQ15013 274 aaPredicted RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 ZNHIT3Q15649 155 aaPredicted RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 ZNF239Q16600 458 aaKnown RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 FAM83EQ2M2I3 478 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 HSDL1Q3SXM5 330 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 ZNF876PQ49A33 203 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 RNASE10Q5GAN6 216 aaKnown RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 HACD4Q5VWC8 232 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 CYB5R2Q6BCY4 276 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 DEGS2Q6QHC5 323 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 BAIAP2L2Q6UXY1 529 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 MBOAT1Q6ZNC8 495 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 MRPL21Q7Z2W9 205 aaKnown RBP3.89□□□□□ -1.79
SS18-223ENST00000583595 LRRTM1Q86UE6 522 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 CMTM1Q8IZ96 169 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 CMTM8Q8IZV2 173 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SLC34A3Q8N130 599 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 LRRC75AQ8NAA5 344 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 ZNF248Q8NDW4 579 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 FBXL13Q8NEE6 735 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 PXT1Q8NFP0 134 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 OR51L1Q8NGJ5 315 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 OR1S2Q8NGQ3 325 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 OR2L8Q8NGY9 312 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 OR52E5Q8NH55 327 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 COQ8AQ8NI60 647 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 FLVCR1-AS1Q8TAF5 88 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 STOML3Q8TAV4 291 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 ACTL9Q8TC94 416 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 SPPL2BQ8TCT7 592 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 ZNF675Q8TD23 568 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 CD300LFQ8TDQ1 290 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 RXFP4Q8TDU9 374 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 AP3S1Q92572 193 aa3.89□□□□□ -1.79
SS18-223ENST00000583595 LRRC58Q96CX6 371 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms