RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 OR5R1Q8NH85 324 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 OTOSQ8NHW6 89 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 CNN2Q99439 309 aaKnown RBP11.12□□□□□ -0.63
SS18-222ENST00000582792 CCL13Q99616 98 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 ADI1Q9BV57 179 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 OPA3Q9H6K4 179 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 SIRT7Q9NRC8 400 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4Q9UBX2 424 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 PLXNB1O43157 2135 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 ANKRD61A6NGH8 418 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 M0R129 80 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 NPFFO15130 113 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 GPR37O15354 613 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 PIN1P1O15428 100 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 SPARCP09486 303 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 ALOX5APP20292 161 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 WDR38Q5JTN6 314 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 DEGS2Q6QHC5 323 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 Q6ZTK2 550 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 SLC36A1Q7Z2H8 476 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 DPY19L4Q7Z388 723 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 REC114Q7Z4M0 266 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 DCXRQ7Z4W1 244 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 BCDIN3DQ7Z5W3 292 aaKnown RBP11.11□□□□□ -0.63
SS18-222ENST00000582792 C11orf53Q8IXP5 236 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 Q8N7P7 452 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 RNF133Q8WVZ7 376 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 CYGBQ8WWM9 190 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 TFAP2CQ92754 450 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 PPA2Q9H2U2 334 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 CLN6Q9NWW5 311 aa11.11□□□□□ -0.63
SS18-222ENST00000582792 KMT2CQ8NEZ4 4911 aaKnown RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 ZNF878C9JN71 531 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 SELENOFO60613 162 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 ENTPD6O75354 484 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 PAHP00439 452 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 APOC1P02654 83 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 PRB2P02812 416 aaPredicted RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 LYNP07948 512 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 PSKH1P11801 424 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 GABRA5P31644 462 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 SAA4P35542 130 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 RPS27P42677 84 aaKnown RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 HSPA13P48723 471 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 GRB2P62993 217 aaKnown RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 KLRD1Q13241 179 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 EIF2B1Q14232 305 aaKnown RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 FAM189A2Q15884 450 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 WDR86Q86TI4 376 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 FAM216BQ8N7L0 139 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 C8orf46Q8TAG6 207 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 LRRC29Q8WV35 223 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 ASB17Q8WXJ9 295 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 TNFRSF14Q92956 283 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 SLAMF6Q96DU3 332 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 DCTN5Q9BTE1 182 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 ABHD6Q9BV23 337 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 NIPAL2Q9H841 368 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 ADGRL4Q9HBW9 690 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 MRPS18AQ9NVS2 196 aaKnown RBP11.1□□□□□ -0.63
SS18-222ENST00000582792 DNAJC27Q9NZQ0 273 aa11.1□□□□□ -0.63
SS18-222ENST00000582792 A0A1W2PRD5 423 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 A0A1W2PRF3 423 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 A0A1W2PRM7 423 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 ANKRD30BLA7E2S9 258 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 XRCC2O43543 280 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 NDUFB3O43676 98 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 OR2T7P0C7T2 308 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 DCTDP32321 178 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 DDOSTP39656 456 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 VHLP40337 213 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 OPRL1P41146 370 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 NAA10P41227 235 aaPredicted RBP11.09□□□□□ -0.63
SS18-222ENST00000582792 SLC15A1P46059 708 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 TGM4P49221 684 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 EFNB2P52799 333 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 DLX1P56177 255 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 ISL1P61371 349 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 ACSM1Q08AH1 577 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 KCTD18Q6PI47 426 aaPredicted RBP11.09□□□□□ -0.63
SS18-222ENST00000582792 C11orf88Q6PI97 169 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 WDR82Q6UXN9 313 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 EGFL6Q8IUX8 553 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 SLC35F2Q8IXU6 374 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 C8orf59Q8N0T1 100 aaPredicted RBP11.09□□□□□ -0.63
SS18-222ENST00000582792 OR1M1Q8NGA1 313 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 OR2T27Q8NH04 317 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 OR8S1Q8NH09 359 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 FBLIM1Q8WUP2 373 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 CFHR4Q92496 578 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 SPSB4Q96A44 273 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 C12orf43Q96C57 262 aaKnown RBP11.09□□□□□ -0.63
SS18-222ENST00000582792 KCNJ15Q99712 375 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 SP140LQ9H930 580 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 DNAJB11Q9UBS4 358 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 LAMP5Q9UJQ1 280 aa11.09□□□□□ -0.63
SS18-222ENST00000582792 EXOGQ9Y2C4 368 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms