RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SSX5O60225 188 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 CA11O75493 328 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 CSTBP04080 98 aaKnown RBP19.65■□□□□ 0.74
CCDC47-204ENST00000582252 SERPINA5P05154 406 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 GIPP09681 153 aaPredicted RBP19.65■□□□□ 0.74
CCDC47-204ENST00000582252 EDN3P14138 238 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 NAT1P18440 290 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 DNASE1P24855 282 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 TMEM50BP56557 158 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 ARFRP1Q13795 201 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 C4orf46Q504U0 113 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 PLAC9Q5JTB6 97 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 FBXW9Q5XUX1 488 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 Q6ZS92 163 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 C1QL2Q7Z5L3 287 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 OR4S1Q8NGB4 309 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 ARHGAP5-AS1Q96IT6 56 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 SLC6A7Q99884 636 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 OPA3Q9H6K4 179 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 SERPINE3A8MV23 424 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 HLA-HP01893 362 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 RAB1AP62820 205 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 CXADRP78310 365 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 PMP22Q01453 160 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 RSU1Q15404 277 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 GVQW1Q8N7I0 195 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 ZDHHC22Q8N966 263 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 APOBEC3DQ96AK3 386 aaPredicted RBP19.64■□□□□ 0.73
CCDC47-204ENST00000582252 OCSTAMPQ9BR26 566 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 POFUT1Q9H488 388 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 C12orf49Q9H741 205 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 MGAT4AQ9UM21 535 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 HSPB11Q9Y547 144 aa19.64■□□□□ 0.73
CCDC47-204ENST00000582252 SNAPC5O75971 98 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 BLVRBP30043 206 aaPredicted RBP19.63■□□□□ 0.73
CCDC47-204ENST00000582252 OR3A2P47893 321 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 RAP2BP61225 183 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 DMRTC1Q5HYR2 192 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 NLRC3Q7RTR2 1065 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 OR4K15Q8NH41 348 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 GRPEL2Q8TAA5 225 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 ASB13Q8WXK3 278 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 EXTL1Q92935 676 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 FAM210AQ96ND0 272 aa19.63■□□□□ 0.73
CCDC47-204ENST00000582252 EIF3KQ9UBQ5 218 aaKnown RBP19.63■□□□□ 0.73
CCDC47-204ENST00000582252 MED19A0JLT2 244 aaPredicted RBP19.62■□□□□ 0.73
CCDC47-204ENST00000582252 C5orf49A4QMS7 147 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 FOXI3A8MTJ6 420 aaPredicted RBP19.62■□□□□ 0.73
CCDC47-204ENST00000582252 SS18L1O75177 396 aaPredicted RBP19.62■□□□□ 0.73
CCDC47-204ENST00000582252 PDGFAP04085 211 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 HRH1P35367 487 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 GK2Q14410 553 aaPredicted RBP19.62■□□□□ 0.73
CCDC47-204ENST00000582252 PLCXD3Q63HM9 321 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 MOB3CQ70IA8 216 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 CD163Q86VB7 1156 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 OR1K1Q8NGR3 316 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 ABHD17AQ96GS6 310 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 PRSS50Q9UI38 385 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 SVILO95425 2214 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 ATMQ13315 3056 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 BOD1L1Q8NFC6 3051 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 TLN1Q9Y490 2541 aaKnown RBP19.62■□□□□ 0.73
CCDC47-204ENST00000582252 LOC100509620A0A075B734 347 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 OR14I1A6ND48 311 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 TMEM8BA6NDV4 472 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 AQP7O14520 342 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 CSN2P05814 226 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 CCNOP22674 350 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 FOXG1P55316 489 aaPredicted RBP19.62■□□□□ 0.73
CCDC47-204ENST00000582252 NKPD1Q17RQ9 610 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 OR52W1Q6IF63 320 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 C9orf62Q8N4C0 152 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 OR52B4Q8NGK2 314 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 OR2T35Q8NGX2 323 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 OR10K1Q8NGX5 313 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 PIGCQ92535 297 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 PECRQ9BY49 303 aa19.62■□□□□ 0.73
CCDC47-204ENST00000582252 TPRP12270 2363 aaKnown RBP19.61■□□□□ 0.73
CCDC47-204ENST00000582252 OR4E1P0C645 316 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 GSTT2P0CG29 244 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 APLNRP35414 380 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 VAX1Q5SQQ9 334 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 ASCL4Q6XD76 172 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 MRPL21Q7Z2W9 205 aaKnown RBP19.61■□□□□ 0.73
CCDC47-204ENST00000582252 FTMTQ8N4E7 242 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 RBMXL3Q8N7X1 1067 aaKnown RBP19.61■□□□□ 0.73
CCDC47-204ENST00000582252 PXT1Q8NFP0 134 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 OR13C8Q8NGS7 320 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 MRPS24Q96EL2 167 aaKnown RBP19.61■□□□□ 0.73
CCDC47-204ENST00000582252 Q96M66 194 aa19.61■□□□□ 0.73
CCDC47-204ENST00000582252 HTR3BO95264 441 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 MPPED2Q15777 294 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 ATPAF1Q5TC12 328 aaPredicted RBP19.6■□□□□ 0.73
CCDC47-204ENST00000582252 TMED4Q7Z7H5 227 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 ARRDC1Q8N5I2 433 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 CSNK2A3Q8NEV1 391 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 OR2AK2Q8NG84 335 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 SNAPC3Q92966 411 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 SARAFQ96BY9 339 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 RADILQ96JH8 1075 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms