RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 STEAP3Q658P3 488 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 COLCA1Q6ZS62 124 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 LRRTM1Q86UE6 522 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 CDH26Q8IXH8 852 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 Q8N402 240 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 SYNPRQ8TBG9 265 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 LGALS14Q8TCE9 139 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 PPP1R14BQ96C90 147 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 SORCS2Q96PQ0 1159 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 TRAF4Q9BUZ4 470 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 OPA3Q9H6K4 179 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 ZNF275Q9NSD4 429 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 LAMP3Q9UQV4 416 aa11.55□□□□□ -0.56
CSNK1D-220ENST00000581737 DHRS7CA6NNS2 312 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 CENPXA8MT69 81 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 SMAD7O15105 426 aaKnown RBP11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 SOD3P08294 240 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 ZNF250P15622 560 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 ELK1P19419 428 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 CCL1P22362 96 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 BDKRB2P30411 391 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 ZNF79Q15937 498 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 RSPO1Q2MKA7 263 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 Q5PR19 223 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 HES5Q5TA89 166 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 MBNL2Q5VZF2 373 aaKnown RBP11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 FAM57BQ71RH2 274 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 OR8B12Q8NGG6 310 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 SLC25A40Q8TBP6 338 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 SLC22A4Q9H015 551 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 LIN7BQ9HAP6 207 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 TMEM138Q9NPI0 162 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 BEX4Q9NWD9 120 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 CGGBP1Q9UFW8 167 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 STAB1Q9NY15 2570 aa11.54□□□□□ -0.56
CSNK1D-220ENST00000581737 ARID1AO14497 2285 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 ARFGEF3Q5TH69 2177 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 IGLV3-9A0A075B6K5 115 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 PFDN1O60925 122 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 NGFP01138 241 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 SNRPBP14678 240 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 HTR2CP28335 458 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 AP3S2P59780 193 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 ASAH1Q13510 395 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 SPATA46Q5T0L3 261 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 C11orf71Q6IPW1 123 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 NR2C2APQ86WQ0 139 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 RDH10Q8IZV5 341 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 OR51A4Q8NGJ6 313 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 OR10AC1Q8NH08 325 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 KLF14Q8TD94 323 aaPredicted RBP11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 IGFBPL1Q8WX77 278 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 PP6455Q8WZ26 134 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 RFT1Q96AA3 541 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 MARS2Q96GW9 593 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 SYT3Q9BQG1 590 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 MRPL37Q9BZE1 423 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 OR2J1Q9GZK6 312 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 ABCG5Q9H222 651 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 DYNLRB1Q9NP97 96 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 DIABLOQ9NR28 239 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 STARD10Q9Y365 291 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 CSPG4Q6UVK1 2322 aa11.53□□□□□ -0.56
CSNK1D-220ENST00000581737 A0A0A6YYH2 397 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 LOC100289279A0A1B0GTE1 492 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 LOC390937A0A1W2PQ73 354 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 A6NJ64 397 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 M0R233 179 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 CTDSPLO15194 276 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 XRCC2O43543 280 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 IGHV3-13P01766 116 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 HLA-DQB1P01920 261 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 EIF4EP06730 217 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 RAC2P15153 192 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 SELEP16581 610 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 MNDAP41218 407 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 PPOXP50336 477 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 NKPD1Q17RQ9 610 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 SWI5Q1ZZU3 235 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 SHEQ5VZ18 495 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 FBXW12Q6X9E4 464 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 MRPL21Q7Z2W9 205 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 JAGN1Q8N5M9 183 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 PNLDC1Q8NA58 520 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 OR1M1Q8NGA1 313 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 OR4M1Q8NGD0 313 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 ENKURQ8TC29 256 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 OR51E1Q8TCB6 317 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 Q96MF0 132 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 TECTBQ96PL2 329 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 SOSTQ9BQB4 213 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 C7orf50Q9BRJ6 194 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 CACNG6Q9BXT2 260 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 PPP1R3EQ9H7J1 279 aa11.52□□□□□ -0.57
CSNK1D-220ENST00000581737 GPR84Q9NQS5 396 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms