RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TMEM53Q6P2H8 277 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 CENPQQ7L2Z9 268 aaPredicted RBP0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 CTAGE6Q86UF2 777 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 ITPRIPQ8IWB1 547 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 SLC30A8Q8IWU4 369 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 GABRG1Q8N1C3 465 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 WDR31Q8NA23 367 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 OR2M7Q8NG81 312 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 OR1S1Q8NH92 325 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 FAM81AQ8TBF8 368 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 OR5P3Q8WZ94 311 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 SCGB3A2Q96PL1 93 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 GSDMAQ96QA5 445 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 NAA50Q9GZZ1 169 aaKnown RBP0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 CYP3A43Q9HB55 503 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 FANCEQ9HB96 536 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 CCNB1IP1Q9NPC3 277 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 TUBG2Q9NRH3 451 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 TREX1Q9NSU2 369 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 TMEM106BQ9NUM4 274 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 AHSPQ9NZD4 102 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 TBC1D24Q9ULP9 559 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 NDRG2Q9UN36 371 aaKnown RBP0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 ACOT9Q9Y305 439 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 ICOSQ9Y6W8 199 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 ENPP4Q9Y6X5 453 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 ELP1O95163 1332 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 MYBPHLA2RUH7 354 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 TRIM64CA6NLI5 447 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 IGLL5B9A064 214 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 MYL12BO14950 172 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 CDS2O95674 445 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 CXorf1O96002 111 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 IGHV3-53P01767 116 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 HLA-HP01893 362 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 KRT14P02533 472 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 OR8G3PP0DMU2 310 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 GSTM3P21266 225 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 GNRHRP30968 328 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 ERFP50548 548 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 MERTKQ12866 999 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 RCN1Q15293 331 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 TWF2Q6IBS0 349 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 EIF3MQ7L2H7 374 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 BBS5Q8N3I7 341 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 FAM57AQ8TBR7 257 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 MRPL48Q96GC5 212 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 SLC25A44Q96H78 314 aaPredicted RBP0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 UBE2E2Q96LR5 201 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 CHP1Q99653 195 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 NAPGQ99747 312 aaPredicted RBP0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 API5Q9BZZ5 524 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 PRSS16Q9NQE7 514 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 MYEF2Q9P2K5 600 aaKnown RBP0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 PPIL1Q9Y3C6 166 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 ZNF337Q9Y3M9 751 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 SAR1BQ9Y6B6 198 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 BAHCC1Q9P281 2608 aa0.97□□□□□ -2.25
SMCHD1-206ENST00000581631 BRD4O60885 1362 aaPredicted RBP0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 SVILO95425 2214 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF608Q9ULD9 1512 aaPredicted RBP0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 KCNE1BA0A087WTH5 132 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 SERTM2A0A1B0GWG4 89 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 LINC01619G3V211 115 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 PSCAO43653 123 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 TRGV3P03979 118 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 KRT16P08779 473 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 CFHR2P36980 270 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 LGALS7P47929 136 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 GBE1Q04446 702 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 IDI1Q13907 227 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 RPEL1Q2QD12 228 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 SPANXN2Q5MJ10 180 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 CLEC2AQ6UVW9 174 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 FAM122BQ7Z309 247 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 LUZP2Q86TE4 346 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 CA5BP1Q8WTZ4 195 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 TMEM175Q9BSA9 504 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 HIGD2AQ9BW72 106 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 RDH14Q9HBH5 336 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 LYRM4Q9HD34 91 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 TMEM38BQ9NVV0 291 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 MCUBQ9NWR8 336 aa0.96□□□□□ -2.26
SMCHD1-206ENST00000581631 A0A075B6Q4 140 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 GOLGA8JA6NMD2 632 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 CCDC169A6NNP5 214 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 CTAG2O75638 210 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 AGTP01019 485 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 UBCP0CG48 685 aaKnown RBP0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 GOLGA8HP0CJ92 632 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 P0DMU3 169 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 FAM231AP0DMU4 169 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 FAM231CP0DMU5 169 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 TEAD1P28347 426 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 SLC6A1P30531 599 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 ATP6V0D1P61421 351 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 LRRC74AQ0VAA2 488 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 KRTAP21-3Q3LHN1 58 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 COMTD1Q86VU5 262 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 LYPD6Q86Y78 171 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms