RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 POLR2J3Q9H1A7 115 aaKnown RBP6□□□□□ -1.45
SMARCE1-217ENST00000580654 YY1AP1Q9H869 796 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 TBC1D23Q9NUY8 699 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 NOL12Q9UGY1 213 aaKnown RBP eCLIP6□□□□□ -1.45
SMARCE1-217ENST00000580654 CYB5R1Q9UHQ9 305 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 LINC00527Q9UJ94 153 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 A4GNTQ9UNA3 340 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 B9D1Q9UPM9 204 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 CORO2BQ9UQ03 480 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 A0A1W2PPH5 198 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 MEX3AA1L020 520 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 HTR3EA5X5Y0 456 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 TRPC5OSA6NMA1 111 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 EVPLLA8MZ36 301 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 UBDO15205 165 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 LY6G6CO95867 125 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 VIMP08670 466 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 KITP10721 976 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 GP9P14770 177 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 SPNP16150 400 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 GLRA1P23415 457 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 DDOSTP39656 456 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 RPS27P42677 84 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 GPR4P46093 362 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 CAPZA1P52907 286 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 FXYD6P3P58550 94 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 DYNC1I2Q13409 638 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 FHL3Q13643 280 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 KIR2DS1Q14954 304 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 FAM76BQ5HYJ3 339 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 MINOS1Q5TGZ0 78 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 ASPHD1Q5U4P2 390 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 LCN8Q6JVE9 175 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 PLBD1Q6P4A8 553 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 DRAM2Q6UX65 266 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 LCNL1Q6ZST4 164 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 SLC16A9Q7RTY1 509 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 DHDDSQ86SQ9 333 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 CALHM1Q8IU99 346 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 KIRREL3Q8IZU9 778 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 CYB561A3Q8NBI2 242 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 OR8U1Q8NH10 309 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 SLC26A7Q8TE54 656 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 HPSE2Q8WWQ2 592 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 SPDL1Q96EA4 605 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 RNFT2Q96EX2 444 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 AKR1E2Q96JD6 320 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 CDRT15Q96T59 188 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 NRIP3Q9NQ35 241 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 C19orf73Q9NVV2 129 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 MRPL22Q9NWU5 206 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 HHLA2Q9UM44 414 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 RHBDD3Q9Y3P4 386 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 MINOS1-NBL1R4GNA1 71 aa5.99□□□□□ -1.45
SMARCE1-217ENST00000580654 PKHD1P08F94 4074 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 hCG_38984A0A1B0GV85 526 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 hCG_1809904A0A1W2PP81 198 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 A0A1W2PPE2 198 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 A0A1W2PR64 198 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 A0A1W2PRV1 198 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 PTP4A3O75365 173 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 MTRF1O75570 445 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 IGHV4-30-4P0DP06 118 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 PIPP12273 146 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 MRPL19P49406 292 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 GZMMP51124 257 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 PRKXP51817 358 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 MTPNP58546 118 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 PSMA6P60900 246 aaKnown RBP5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 CYP51A1Q16850 503 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 ZBED5Q49AG3 693 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 AGBL2Q5U5Z8 902 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 TBPL2Q6SJ96 375 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 CCDC80Q76M96 950 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 TCF23Q7RTU1 214 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 THAP5Q7Z6K1 395 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 Q8N1Y9 231 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 OR4P4Q8NGL7 312 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 NDNFQ8TB73 568 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 CHPT1Q8WUD6 406 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 SPTSSAQ969W0 71 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 SGK3Q96BR1 496 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 GPX7Q96SL4 187 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 SPATA25Q9BR10 227 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 OPA3Q9H6K4 179 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 N6AMT1Q9Y5N5 214 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 IER3IP1Q9Y5U9 82 aa5.98□□□□□ -1.45
SMARCE1-217ENST00000580654 VPS13DQ5THJ4 4388 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 A0A087WUU8 490 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 IGHV2-26A0A0B4J1V2 119 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 RFPL4AA6NLU0 287 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 TMEM210A6NLX4 147 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 LINC01548A6NM66 108 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 DBX1A6NMT0 343 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 A8MZ25 164 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 RFPL4AL1F8VTS6 287 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 CCRL2O00421 344 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 XRCC2O43543 280 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 SLC25A17O43808 307 aa5.97□□□□□ -1.45
SMARCE1-217ENST00000580654 TXNDC12O95881 172 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms