RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 BTN2A1Q7KYR7 527 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 EGFL6Q8IUX8 553 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.29□□□□□ -0.44
SS18-212ENST00000579061 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 RHOXF1Q8NHV9 184 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 ANGPTL6Q8NI99 470 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 ST8SIA4Q92187 359 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 STMN2Q93045 179 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 C10orf35Q96D05 121 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 SEH1LQ96EE3 360 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 Q96MT0 163 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 RDH12Q96NR8 316 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 ZMAT3Q9HA38 289 aaKnown RBP12.29□□□□□ -0.44
SS18-212ENST00000579061 RASL12Q9NYN1 266 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 NLKQ9UBE8 527 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 RPUSD1Q9UJJ7 312 aaKnown RBP12.29□□□□□ -0.44
SS18-212ENST00000579061 ANK2Q01484 3957 aa12.29□□□□□ -0.44
SS18-212ENST00000579061 LOC100130705A0A1B0GUX0 176 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 J3QT63 122 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 SLC16A6O15403 523 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 SYT7O43581 403 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 NOS1APO75052 506 aaPredicted RBP12.28□□□□□ -0.44
SS18-212ENST00000579061 RHBDL1O75783 438 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 TOX4O94842 621 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 ACAA1P09110 424 aaPredicted RBP12.28□□□□□ -0.44
SS18-212ENST00000579061 UBCP0CG48 685 aaKnown RBP12.28□□□□□ -0.44
SS18-212ENST00000579061 MMP9P14780 707 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 IL13RA1P78552 427 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 GPR157Q5UAW9 335 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 FDX2Q6P4F2 183 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 HAGHLQ6PII5 290 aaPredicted RBP12.28□□□□□ -0.44
SS18-212ENST00000579061 ENTHD1Q8IYW4 607 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 ACBD7Q8N6N7 88 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 SIGLECL1Q8N7X8 197 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 LY6G5BQ8NDX9 201 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 OR5T2Q8NGG2 359 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 TMIGD2Q96BF3 282 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 MRPL48Q96GC5 212 aaKnown RBP12.28□□□□□ -0.44
SS18-212ENST00000579061 WDFY2Q96P53 400 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 ADI1Q9BV57 179 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 SIRPDQ9H106 197 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 PLEKHA1Q9HB21 404 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 GPR173Q9NS66 373 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 FAM118AQ9NWS6 357 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 GNG8Q9UK08 70 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 POLDIP2Q9Y2S7 368 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 KPTNQ9Y664 436 aa12.28□□□□□ -0.44
SS18-212ENST00000579061 DAPL1A0PJW8 107 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 PQLC2LA1A4F0 135 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 ANKRD61A6NGH8 418 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 OR2AT4A6NND4 320 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 SIGLEC5O15389 551 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 BAG2O95816 211 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 CAV3P56539 151 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 UBA52P62987 128 aaKnown RBP12.27□□□□□ -0.45
SS18-212ENST00000579061 ELF3P78545 371 aaPredicted RBP12.27□□□□□ -0.45
SS18-212ENST00000579061 PDCD1Q15116 288 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 TP53I3Q53FA7 332 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 DMRTC1Q5HYR2 192 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 TMEM244Q5VVB8 128 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 METTL11BQ5VVY1 283 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.45
SS18-212ENST00000579061 PRSS35Q8N3Z0 413 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 FAM216BQ8N7L0 139 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 POC1AQ8NBT0 407 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 C8orf46Q8TAG6 207 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 RNF166Q96A37 237 aaPredicted RBP12.27□□□□□ -0.45
SS18-212ENST00000579061 LGALS12Q96DT0 336 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 GAFA1Q96PS6 74 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 TBX15Q96SF7 602 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 C8orf4Q9NR00 106 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 SNTG1Q9NSN8 517 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 ACOXLQ9NUZ1 547 aa12.27□□□□□ -0.45
SS18-212ENST00000579061 A0A1B0GW55 424 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 LOC107986453A0A1B0GWG9 222 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 GATBO75879 557 aaKnown RBP12.26□□□□□ -0.45
SS18-212ENST00000579061 DUX4L2P0CJ85 424 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 DUX4L3P0CJ86 424 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 DUX4L4P0CJ87 422 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 DUX4L5P0CJ88 424 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 DUX4L6P0CJ89 424 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 DUX4L7P0CJ90 424 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 DBTP11182 482 aaKnown RBP12.26□□□□□ -0.45
SS18-212ENST00000579061 PSG2P11465 335 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 MPZP25189 248 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 KIR3DL2P43630 455 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 HAAOP46952 286 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 CCR9P51686 369 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 OR12D2P58182 307 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 GMFBP60983 142 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 ACTA2P62736 377 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 ACTG2P63267 376 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 ZNF91Q05481 1191 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 ODF4Q2M2E3 257 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 SMIM21Q3B7S5 101 aa12.26□□□□□ -0.45
SS18-212ENST00000579061 DUX4L9Q6RFH8 374 aaPredicted RBP12.26□□□□□ -0.45
SS18-212ENST00000579061 ACP7Q6ZNF0 438 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms