RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 DNAJB9Q9UBS3 223 aa7.56□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PIGLQ9Y2B2 252 aa7.56□□□□□ -1.2
CDK5RAP3-211ENST00000578996 A0A0U1RQV5 110 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CCDC182A6NF36 153 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 M0R129 80 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ANGPTL7O43827 346 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ACAA1P09110 424 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PSG2P11465 335 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 HOXB6P17509 224 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DCTDP32321 178 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CRISP1P54107 249 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 KRTAP10-3P60369 221 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MFGE8Q08431 387 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 RIPPLY1Q0D2K3 151 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZSCAN26Q16670 478 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF829Q3KNS6 432 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 FAM76BQ5HYJ3 339 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF684Q5T5D7 378 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 METAP1DQ6UB28 335 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PLEKHG7Q6ZR37 379 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 Q6ZSV7 163 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 BCDIN3DQ7Z5W3 292 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF671Q8TAW3 534 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PPP1R14AQ96A00 147 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DUS3LQ96G46 650 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF488Q96MN9 340 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR8B4Q96RC9 309 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CNN2Q99439 309 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PRRG3Q9BZD7 231 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR51I2Q9H344 312 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 METTL8Q9H825 291 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TCF7L1Q9HCS4 588 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 H2AFY2Q9P0M6 372 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ENPP5Q9UJA9 477 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 VPREB3Q9UKI3 123 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 COPS3Q9UNS2 423 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 POMPQ9Y244 141 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TMEM14AQ9Y6G1 99 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DOCK11Q5JSL3 2073 aa7.55□□□□□ -1.2
CDK5RAP3-211ENST00000578996 IGKV1D-17A0A075B6S4 117 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 A6NIN4 97 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR5B21A6NL26 309 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 RFPL4AA6NLU0 287 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PRR32B1ATL7 298 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 LOC110117498-PIK3R3F6TDL0 507 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 RFPL4AL1F8VTS6 287 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 M0R1W7 72 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MAGEB4O15481 346 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PRKYO43930 277 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF254O75437 659 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MTRF1O75570 445 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DNAJC8O75937 253 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 NRASP01111 189 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 HAAOP46952 286 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CEBPDP49716 269 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DAPP51397 102 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 UBE2E1P51965 193 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CAV3P56539 151 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CXCR4P61073 352 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PTGES3Q15185 160 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 LY6EQ16553 131 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PDLIM3Q53GG5 364 aaPredicted RBP7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 BCL2L15Q5TBC7 163 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 NCR3LG1Q68D85 454 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DEGS2Q6QHC5 323 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ASRGL1Q7L266 308 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 SLC35F2Q8IXU6 374 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF679Q8IYX0 411 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR5A2Q8NGI9 324 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR51G2Q8NGK0 314 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 C8orf46Q8TAG6 207 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ASB17Q8WXJ9 295 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DNAJC9Q8WXX5 260 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 AQP3Q92482 292 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TBX5Q99593 518 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 RBM4BQ9BQ04 359 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PPA2Q9H2U2 334 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MMP27Q9H306 513 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 GPR173Q9NS66 373 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 KRT84Q9NSB2 600 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 OR14J1Q9UGF5 321 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MAB21L2Q9Y586 359 aa7.54□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MGAM2Q2M2H8 2515 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TCRBV3S1A0A5B6 114 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ACOD1A6NK06 481 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ZNF670-ZNF695F2Z2N8 137 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 H3BSH0 61 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 H3BUX3 64 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 SLC1A7O00341 560 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 EBAG9O00559 213 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 SYNGR1O43759 233 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 MITFO75030 526 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 DHRS3O75911 302 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 CLPXO76031 633 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 RPP14O95059 124 aaKnown RBP7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 TTRP02766 147 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 ATP6V1B1P15313 513 aa7.53□□□□□ -1.2
CDK5RAP3-211ENST00000578996 PAX6P26367 422 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms