RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ZNF275Q9NSD4 429 aaPredicted RBP3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 FAIMQ9NVQ4 179 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 BABAM2Q9NXR7 383 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 MRPL15Q9P015 296 aaKnown RBP3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 EIF3KQ9UBQ5 218 aaKnown RBP3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 GNG8Q9UK08 70 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 POU2F3Q9UKI9 436 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 SPEF1Q9Y4P9 236 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 ZFHX3Q15911 3703 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TRAV8-7A0A075B6U6 113 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 IGKV1-12A0A0C4DH73 117 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF816-ZNF321PA0A0X1KG74 233 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 A0A1W2PPW3 197 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TRIM64BA6NI03 449 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM212A6NML5 194 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 PTGES3LE9PB15 166 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 F5H0A9 414 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TBX1O43435 398 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 SPRY3O43610 288 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 RGS10O43665 173 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TIMM8AO60220 97 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 GMDSO60547 372 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 GPX5O75715 221 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 FSTL3O95633 263 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 IGKV1D-12P01611 117 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 IGHV2-70P01814 119 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MT-ND5P03915 603 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TACSTD2P09758 323 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 DAOP14920 347 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CPEP16870 476 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ADRA2CP18825 462 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CA6P23280 308 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CFL1P23528 166 aaKnown RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 DNASE1P24855 282 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 GCH1P30793 250 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 IL2RGP31785 369 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CFHR2P36980 270 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 LIPAP38571 399 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ART1P52961 327 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ATP5J2P56134 94 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ZP1P60852 638 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ERVK11-1P61568 191 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 LMO4P61968 165 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CCL8P80075 99 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MLLT11Q13015 90 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MALLQ13021 153 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MRPL28Q13084 256 aaKnown RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 PRDX4Q13162 271 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MED21Q13503 144 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 SPHARQ15513 63 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TAF13Q15543 124 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TIGD6Q17RP2 521 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 PCGF3Q3KNV8 242 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 DMRTC1Q5HYR2 192 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 FAM27D1Q5T7N8 215 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 SYT6Q5T7P8 510 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 PRAMEF6Q5VXH4 476 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 RPL22L1Q6P5R6 122 aaKnown RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF773Q6PK81 442 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ARL9Q6T311 187 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 WDR82Q6UXN9 313 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 UNQ6126/PRO20091Q6UXV3 157 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF826PQ6ZT77 177 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 UTS2BQ765I0 119 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 DOK3Q7L591 496 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CALHM1Q8IU99 346 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 PHC2Q8IXK0 858 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 GCSAMQ8N6F7 178 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CSNK2A3Q8NEV1 391 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 OR51A2Q8NGJ7 313 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 OR5L1Q8NGL2 311 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 OR13G1Q8NGZ3 307 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF420Q8TAQ5 688 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 HAVCR2Q8TDQ0 301 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 GHSRQ92847 366 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MUL1Q969V5 352 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ORAI1Q96D31 301 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ELMOD3Q96FG2 381 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CYYR1Q96J86 154 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 FAM71F1Q96KD3 344 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 C1orf147Q96MC9 270 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 DERL3Q96Q80 235 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 OR2V2Q96R30 315 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ADAT1Q9BUB4 502 aaKnown RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 OR51I2Q9H344 312 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MS4A5Q9H3V2 200 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CXorf56Q9H5V9 222 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 SP140LQ9H930 580 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 HES4Q9HCC6 221 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 DYNLRB1Q9NP97 96 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CYSLTR2Q9NS75 346 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 IL19Q9UHD0 177 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF222Q9UK12 451 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 FBXO9Q9UK97 447 aaPredicted RBP3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 ZDHHC8Q9ULC8 765 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 LRCH1Q9Y2L9 728 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 TPRKBQ9Y3C4 175 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 MPC1Q9Y5U8 109 aa3.17□□□□□ -1.9
SMARCE1-215ENST00000578995 CUBNO60494 3623 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms