RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 RPUSD1Q9UJJ7 312 aaKnown RBP17.49■□□□□ 0.39
HCFC1R1-209ENST00000576921 GNG8Q9UK08 70 aa17.49■□□□□ 0.39
HCFC1R1-209ENST00000576921 V9GYS6 101 aa17.49■□□□□ 0.39
HCFC1R1-209ENST00000576921 A0A1B0GTI1 187 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 ENTPD6O75354 484 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 MMP9P14780 707 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 AMY2BP19961 511 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 ARF6P62330 175 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 TUSC1Q2TAM9 212 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 CLVS2Q5SYC1 327 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 TRUB1Q8WWH5 349 aaKnown RBP17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 AQP3Q92482 292 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 TMIGD2Q96BF3 282 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 RNFT2Q96EX2 444 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 C1orf147Q96MC9 270 aaPredicted RBP17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 PLEKHA1Q9HB21 404 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 NLKQ9UBE8 527 aa17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.48■□□□□ 0.39
HCFC1R1-209ENST00000576921 A0A1B0GVI7 797 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 PRTN3P24158 256 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 GABRA2P47869 451 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 TP53I3Q53FA7 332 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 CATSPERDQ86XM0 798 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 OR14K1Q8NGZ2 314 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 ZNF671Q8TAW3 534 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 RORBQ92753 470 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 GAFA1Q96PS6 74 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 MBOAT4Q96T53 435 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 SIRPDQ9H106 197 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 S100A14Q9HCY8 104 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 ACOXLQ9NUZ1 547 aa17.47■□□□□ 0.39
HCFC1R1-209ENST00000576921 TMEM89A2RUT3 159 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 OR2AT4A6NND4 320 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 SYT7O43581 403 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 SULT1C4O75897 302 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 HAAOP46952 286 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 TGM4P49221 684 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 IL13RA1P78552 427 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 ZNF85Q03923 595 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 DEFB112Q30KQ8 113 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 C11orf91Q3C1V1 193 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 ATPAF1Q5TC12 328 aaPredicted RBP17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 ZNF788Q6ZQV5 615 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 ANGPTL6Q8NI99 470 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 LHX4Q969G2 390 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 ZDHHC16Q969W1 377 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 ZNF488Q96MN9 340 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 C9orf16Q9BUW7 83 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 DNTTIP1Q9H147 329 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 CNTD2Q9H8S5 307 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 ZMAT3Q9HA38 289 aaKnown RBP17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 SLC25A10Q9UBX3 287 aaPredicted RBP17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 GMPPBQ9Y5P6 360 aa17.46■□□□□ 0.39
HCFC1R1-209ENST00000576921 DLGAP1O14490 977 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 NDUFB7P17568 137 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 CCL1P22362 96 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 SNRPGP62308 76 aaKnown RBP17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 PDCD1Q15116 288 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 DGUOKQ16854 277 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 ZNF573Q86YE8 665 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 PDZD9Q8IXQ8 264 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 BATF2Q8N1L9 274 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 TRMT10AQ8TBZ6 339 aaKnown RBP17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 NPRL2Q8WTW4 380 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 SLC25A28Q96A46 364 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 MED30Q96HR3 178 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 ADI1Q9BV57 179 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 AASSQ9UDR5 926 aa17.45■□□□□ 0.38
HCFC1R1-209ENST00000576921 CENPVL3A0A0U1RRI6 287 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 ANKRD61A6NGH8 418 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 DHRS7CA6NNS2 312 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 J3QT63 122 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 GPR37O15354 613 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 SIGLEC5O15389 551 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 SYNGR1O43759 233 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 ACTC1P68032 377 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 ACTA1P68133 377 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 SLC9A3R2Q15599 337 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 SMIM21Q3B7S5 101 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 CDONQ4KMG0 1287 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 MEDAGQ5VYS4 303 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 TMEM42Q69YG0 159 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 VMO1Q7Z5L0 202 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 PQLC1Q8N2U9 271 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 PRSS35Q8N3Z0 413 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 C3orf56Q8N813 242 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 TMEM185AQ8NFB2 350 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 GATAD2BQ8WXI9 593 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 DCTN5Q9BTE1 182 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 ELL3Q9HB65 397 aaPredicted RBP17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 KPTNQ9Y664 436 aa17.44■□□□□ 0.38
HCFC1R1-209ENST00000576921 IGKV1D-17A0A075B6S4 117 aa17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 LOC107986453A0A1B0GWG9 222 aa17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 DAPL1A0PJW8 107 aa17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 PQLC2LA1A4F0 135 aa17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 HOXA3O43365 443 aaPredicted RBP17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 ACAA1P09110 424 aaPredicted RBP17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 PSG2P11465 335 aa17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 CFPP27918 469 aa17.43■□□□□ 0.38
HCFC1R1-209ENST00000576921 COMPP49747 757 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms