RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 OR8D4Q8NGM9 314 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF671Q8TAW3 534 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 FAM81AQ8TBF8 368 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 WIPF2Q8TF74 440 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 CMTM5Q96DZ9 223 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR5M11Q96RB7 305 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 TSSK6Q9BXA6 273 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 WNT10AQ9GZT5 417 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 YY1AP1Q9H869 796 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 IL1RAPQ9NPH3 570 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 RASL12Q9NYN1 266 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 TBL2Q9Y4P3 447 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 A6NDX4 124 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 FAM90A8PA6NJQ4 464 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF732B4DXR9 585 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 K7EIL1 84 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 DUS4LO95620 317 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 PF4P02776 101 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 VSIG8P0DPA2 414 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 GSTT1P30711 240 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 VDAC2P45880 294 aaPredicted RBP9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 DEFB121Q5J5C9 76 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 LINC01590Q5TEZ4 76 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 TMEM200BQ69YZ2 307 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF561Q8N587 486 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR9Q2Q8NGE9 314 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 MALSU1Q96EH3 234 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 NSMCE2Q96MF7 247 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 OCSTAMPQ9BR26 566 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 BTBD10Q9BSF8 475 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 FGF23Q9GZV9 251 aaPredicted RBP9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 C1orf21Q9H246 121 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR51I2Q9H344 312 aa9.4□□□□□ -0.9
CTDNEP1-212ENST00000576613 A0A1W2PRX2 142 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR5B21A6NL26 309 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 H3BUI4 141 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 TNFRSF11BO00300 401 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 MTRF1O75570 445 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 ARG1P05089 322 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 LYNP07948 512 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 CCL3L1P16619 93 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 MAP2K3P46734 347 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 RAB13P51153 203 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 HMGA2P52926 109 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 CD69Q07108 199 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 SSX2Q16385 188 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 CEACAM21Q3KPI0 293 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 CCBE1Q6UXH8 406 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF782Q6ZMW2 699 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 LHFPL4Q7Z7J7 247 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 CALHM1Q8IU99 346 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR13D1Q8NGV5 346 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR2T27Q8NH04 317 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR4Q3Q8NH05 313 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 OTULINQ96BN8 352 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 RCC1LQ96I51 464 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 AMELYQ99218 206 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 CMC2Q9NRP2 79 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 ARGLU1Q9NWB6 273 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 LYVE1Q9Y5Y7 322 aa9.39□□□□□ -0.91
CTDNEP1-212ENST00000576613 RFPL4AA6NLU0 287 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 E9PQ18 207 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 RFPL4AL1F8VTS6 287 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 F2RL2O00254 374 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 CCNB2O95067 398 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 SOX14O95416 240 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 CLIC3O95833 236 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 GASTP01350 101 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 HSD17B1P14061 328 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 PRDX2P32119 198 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 DYNLT3P51808 116 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR12D2P58182 307 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 CD83Q01151 205 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 CEP78Q5JTW2 689 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 HAGHLQ6PII5 290 aaPredicted RBP9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 ACP7Q6ZNF0 438 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 DYNAPQ8N1N2 210 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 C11orf42Q8N5U0 333 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF454Q8N9F8 522 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 AQP11Q8NBQ7 271 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 POC1AQ8NBT0 407 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR5AU1Q8NGC0 362 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR4M1Q8NGD0 313 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR8B12Q8NGG6 310 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR5A2Q8NGI9 324 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 OTOSQ8NHW6 89 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 AQP3Q92482 292 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 ITFG2Q969R8 447 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 LYZL4Q96KX0 146 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 NIPAL2Q9H841 368 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 ARMC1Q9NVT9 282 aa9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.38□□□□□ -0.91
CTDNEP1-212ENST00000576613 FAM183AA6NL82 134 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 ARPC2O15144 300 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 RBP4P02753 201 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 AZGP1P25311 298 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 MSX2P35548 267 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms